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MatrixDB

MatrixDB is a biological database focused on molecular interactions between extracellular proteins and polysaccharides. MatrixDB takes into account the multimeric nature of the extracellular proteins (for example, collagens, laminins and thrombospondins are multimers). The database was initially released in 2009 and is maintained by the research group of…

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Authors
Emilie Chautard, Guillaume Launay, Nicolas Thierry-Mieg, Romain Salza, Franck Peysselon, Marie Fatoux-Ardore, Sofiane Badaoui, Sylvain Vallet, Lionel Ballut, Dorian Multedo, Syl…
Data types captured
Interactions DataBase, Biochemestry, Biacore, SPR
Description
extracellular matrix interactions database.
Laboratory
IBCP - UMR5086 CNRS / Univ Lyon1 - FRANCE
Organisms
All (Human only possible)
Standards
PSI-MI

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Overview

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Map overview Semantic statistics

MatrixDB

Nodes15
Edges14
Triples10
Avg. degree1.87
Density0.133333
Components1

How this topic connects Entity context

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MatrixDB

Top relations

is a · 2
MatrixDB → active member of the International Molecular Exchange Consortium, biological database focused on molecular interactions between extracellular proteins and polysaccharides
Authors · 1
MatrixDB → Emilie Chautard, Guillaume Launay, Nicolas Thierry-Mieg, Romain Salza, Franck Peysselon, Marie Fatoux-Ardore, Sofiane Badaoui, Sylvain Vallet, Lionel Ballut, Dorian Multedo, Syl…
Data types captured · 1
MatrixDB → Interactions DataBase, Biochemestry, Biacore, SPR
Description · 1
MatrixDB → extracellular matrix interactions database.
Laboratory · 1
MatrixDB → IBCP - UMR5086 CNRS / Univ Lyon1 - FRANCE
Organisms · 1
MatrixDB → All (Human only possible)
Primary citation · 1
MatrixDB → .mw-parser-output cite.citation{font-style:inherit;word-wrap:break-word}.mw-parser-output .citation q{quotes:"\"""\"""'""'"}.mw-parser-output .citation:target{background-color:r…
Standards · 1
MatrixDB → PSI-MI
Website · 1
MatrixDB → http://matrixdb.univ-lyon1.fr

Important terminology Word statistics

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Important terminology

interaction database extracellular data imex proteins molecular databases human interactions group protein also consortium sylvie ricard-blum http univ-lyon1 fr polysaccharides

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
MatrixDBAuthorsEmilie Chautard, Guillaume Launay, Nicolas Thierry-Mieg, Romain Salza, Franck Peysselon, Marie Fatoux-Ardore, Sofiane Badaoui, Sylvain Vallet, Lionel Ballut, Dorian Multedo, Syl…1.00infobox
MatrixDBData types capturedInteractions DataBase, Biochemestry, Biacore, SPR1.00infobox
MatrixDBDescriptionextracellular matrix interactions database.1.00infobox
MatrixDBLaboratoryIBCP - UMR5086 CNRS / Univ Lyon1 - FRANCE1.00infobox
MatrixDBOrganismsAll (Human only possible)1.00infobox
MatrixDBPrimary citation.mw-parser-output cite.citation{font-style:inherit;word-wrap:break-word}.mw-parser-output .citation q{quotes:"\"""\"""'""'"}.mw-parser-output .citation:target{background-color:r…1.00infobox
MatrixDBStandardsPSI-MI1.00infobox
MatrixDBWebsitehttp://matrixdb.univ-lyon1.fr1.00infobox
MatrixDBis abiological database focused on molecular interactions between extracellular proteins and polysaccharides0.90text
MatrixDBis aactive member of the International Molecular Exchange Consortium0.90text

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