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HOMER3: Interactions & Overview

Homer protein homolog 3 is a protein that in humans is encoded by the HOMER3 gene.

Language: English [EN]
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HOMER3 topic overview

The analysis highlights Interactions and Overview as prominent areas in the source structure around HOMER3.

Related topics
5
Source areas
2
Connected nodes
7
Extracted relationships
85
Related term clusters
5
Bridge connections
7

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Interactions · 3 topics
Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
HOMER3, HOMER-3, VESL3, homer scaffolding protein 3, homer scaffold protein 3
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2P8V, 3CVF
Band
19p13.11 · 8|8 B3.3
Bgee
cerebellar vermis · right hemisphere of cerebellum · C1 segment · spleen · muscle of thigh
BioGPS
More reference expression data
Chr.
Chromosome 19 (human) · Chromosome 8 (mouse)

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HOMER3
5Protein · Gene · Protein-protein interaction

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Interactions

For the semantics nerds

You can skip this section if you’re here for content ideas and keyword inspiration.

Advanced semantic analysis

How HOMER3 connects Entity context

The extracted context around HOMER3 shows recurring relationship patterns in the source. For example, HOMER3 → basal part of cell, cell junction, cellular component, cytoplasm, cytosol, dendrite, G protein-coupled glutamate receptor binding, G protein-coupled glutamate receptor signaling pathway, glutamatergic synapse, identical protein binding, membrane, negative regulation of calcineurin-NFAT signaling cascade, negative regulation of interleukin-2 production, neuron projection, plasma membrane, postsynaptic density, postsynaptic membrane, protein binding, protein C-terminus binding, protein domain specific binding Another extracted example is HOMER3 → C1 segment, cerebellar cortex, cerebellar vermis, dentate gyrus of hippocampal formation granule cell, embryo, ganglionic eminence, gastrocnemius muscle, inferior ganglion of vagus nerve, lip, lobe of cerebellum, muscle of thigh, neural layer of retina, right hemisphere of cerebellum, right lobe of thyroid gland, spleen, stromal cell of endometrium, ventricular zone, yolk sac. Use these groups to spot repeated connection types before inspecting the individual relationships.

HOMER3

Top relations

Gene ontology · 24
HOMER3 → basal part of cell, cell junction, cellular component, cytoplasm, cytosol, dendrite, G protein-coupled glutamate receptor binding, G protein-coupled glutamate receptor signaling pathway, glutamatergic synapse, identical protein binding, membrane, negative regulation of calcineurin-NFAT signaling cascade, negative regulation of interleukin-2 production, neuron projection, plasma membrane, postsynaptic density, postsynaptic membrane, protein binding, protein C-terminus binding, protein domain specific binding
Bgee · 18
HOMER3 → C1 segment, cerebellar cortex, cerebellar vermis, dentate gyrus of hippocampal formation granule cell, embryo, ganglionic eminence, gastrocnemius muscle, inferior ganglion of vagus nerve, lip, lobe of cerebellum, muscle of thigh, neural layer of retina, right hemisphere of cerebellum, right lobe of thyroid gland, spleen, stromal cell of endometrium, ventricular zone, yolk sac
RNA expression pattern · 18
HOMER3 → C1 segment, cerebellar cortex, cerebellar vermis, dentate gyrus of hippocampal formation granule cell, embryo, ganglionic eminence, gastrocnemius muscle, inferior ganglion of vagus nerve, lip, lobe of cerebellum, muscle of thigh, neural layer of retina, right hemisphere of cerebellum, right lobe of thyroid gland, spleen, stromal cell of endometrium, ventricular zone, yolk sac
Band · 2
HOMER3 → 19p13.11, 8|8 B3.3
Chr. · 2
HOMER3 → Chromosome 19 (human), Chromosome 8 (mouse)
End · 2
HOMER3 → 18,941,261 bp, 70,294,361 bp
related to Interactions · 2
HOMER3 → RYR1, TRPC1
Aliases · 1
HOMER3 → HOMER3, HOMER-3, VESL3, homer scaffolding protein 3, homer scaffold protein 3
Available structures · 1
HOMER3 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2P8V, 3CVF
BioGPS · 1
HOMER3 → More reference expression data

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

bp gene chr human band protein chromosome 19 homer location function mouse encoded search 941 261 end 18 b3 294

HOMER3 relationships Subject–Predicate–Object triples

TTTA extracted 85 structured relationships around HOMER3. Examples in this analysis include HOMER3 → Aliases → HOMER3, HOMER-3, VESL3, homer scaffolding protein 3, homer scaffold protein 3 and HOMER3 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2P8V, 3CVF. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
HOMER3AliasesHOMER3, HOMER-3, VESL3, homer scaffolding protein 3, homer scaffold protein 31.00infobox
HOMER3Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2P8V, 3CVF1.00infobox
HOMER3Band19p13.111.00infobox
HOMER3Band8|8 B3.31.00infobox
HOMER3Bgeecerebellar vermis1.00infobox
HOMER3Bgeeright hemisphere of cerebellum1.00infobox
HOMER3BgeeC1 segment1.00infobox
HOMER3Bgeespleen1.00infobox
HOMER3Bgeemuscle of thigh1.00infobox
HOMER3Bgeegastrocnemius muscle1.00infobox
HOMER3Bgeeinferior ganglion of vagus nerve1.00infobox
HOMER3Bgeestromal cell of endometrium1.00infobox
HOMER3Bgeeganglionic eminence1.00infobox
HOMER3Bgeeright lobe of thyroid gland1.00infobox
HOMER3Bgeecerebellar cortex1.00infobox
HOMER3Bgeelobe of cerebellum1.00infobox
HOMER3Bgeeventricular zone1.00infobox
HOMER3Bgeeyolk sac1.00infobox
HOMER3Bgeedentate gyrus of hippocampal formation granule cell1.00infobox
HOMER3Bgeeneural layer of retina1.00infobox
HOMER3Bgeelip1.00infobox
HOMER3Bgeeembryo1.00infobox
HOMER3BioGPSMore reference expression data1.00infobox
HOMER3Chr.Chromosome 19 (human)1.00infobox
HOMER3Chr.Chromosome 8 (mouse)1.00infobox
HOMER3DatabasesNCBI: entry; OMA: entry1.00infobox
HOMER3End18,941,261 bp1.00infobox
HOMER3End70,294,361 bp1.00infobox
HOMER3EnsemblENSG000000511281.00infobox
HOMER3Entrez94541.00infobox

Related concept clusters Related term clusters

The concept neighborhoods around HOMER3 bring nearby vocabulary together. In this analysis, examples include Protein, Search and Function. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • gene
    • Homer
    • Location
    • Chromosome
    • Homer3
    • Human
    • Protein
    • B3
    • Bp
    • Chr
    • End
    • Mouse
    • Search
  • HOMER3
    • Protein
    • Search
    • Function
    • Location
    • Chromosome
    • Human
    • Bp
    • Chr
    • Also
    • Homolog
    • Humans
    • Interactions
  • homer3
    • Protein
    • Search
    • Function
    • Location
    • Chromosome
    • Human
    • Bp
    • Chr
    • Also
    • Homolog
    • Humans
    • Interactions
  • protein
    • Cell
    • Search
    • Location
    • Reading
    • References
    • See
    • B3
    • End
    • Family
    • Glutamate
    • Mouse
    • Receptor
  • interactions
    • Reading
    • References
    • See
    • Search
    • Location
    • Human
    • Protein

Connections between topic areas Semantic bridges

For HOMER3, one of the stronger structural bridges in this analysis connects HOMER3 with Interactions. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
HOMER3 — Interactions · splits 4 ⟂ 4
HOMER3 — Overview · splits 5 ⟂ 3

Map overview Semantic statistics

HOMER3

Nodes8
Edges7
Triples85
Avg. degree1.75
Density0.25
Components1

Source & methodology

TTTA analyzes the structure around HOMER3 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Interactions & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — HOMER3 · EN edition · Analysis: TopicsToTalkAbout

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