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Encapsulin

The encapsulins are a family of bacterial proteins that serve as the main structural components of encapsulin nanocompartments. There are several different encapsulin proteins, including EncA, which forms the shell, and EncB, EncC, and EncD, which form the core. They are found in bacteria and archaea. They serve as intracellular structures that…

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Key facts & relationships

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AlphaFold
IPR007544 · PF04454
Available protein structures:
IPR007544 · PF04454
InterPro
IPR007544
PDB
IPR007544 PF04454 (ECOD; PDBsum)
Pfam
PF04454
Symbol
Linocin_M18

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Map overview Semantic statistics

Encapsulin

Nodes39
Edges38
Triples79
Avg. degree1.95
Density0.051282
Components1

How this topic connects Entity context

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Encapsulin

Top relations

has application · 14
Encapsulin → Bioreactors, Biosensors, Drug Delivery, Encapsulins, Engineered, Functionalized, Imaging, Leverage, MRI, SARS-CoV-2, Surface, They, Utilized, Vaccines
related to Family 1 · 9
Encapsulin → C-terminal, Encapsulating Protein, Peroxidase, Pfam, The, These, They, This, TPs
related to Cargo loading mechanism · 8
Encapsulin → C-terminal, Encapsulins, N-terminal, TDs, These, They, This, TPs
related to Structure · 8
Encapsulin → For, HK97-fold, Pyrococcus, Quasibacillus, The, The HK97-fold, Thermotoga, These
related to Family 3 · 7
Encapsulin → Actinobacteria, Phage, Proteobacteria, Their, These, They, This
related to history · 7
Encapsulin → Brevibacterium, Encapsulins, Prokaryotic, The, They, This, When
related to Family 2 · 5
Encapsulin → N-terminal, TDs, Their, They, This
related to Family 4 · 4
Encapsulin → DUF1884, HK97-fold, They, This
related to Function · 3
Encapsulin → Encapsulins, There, They
related to Genomic organization · 3
Encapsulin → Genes, Regulatory, The

Important terminology Word statistics

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Important terminology

encapsulins proteins family cargo systems protein found shell specific protomers use operons targeting genes bacterial serve structure domains iron nanocompartments

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
EncapsulinAlphaFoldIPR0075441.00infobox
EncapsulinAlphaFoldPF044541.00infobox
EncapsulinAvailable protein structures:IPR0075441.00infobox
EncapsulinAvailable protein structures:PF044541.00infobox
EncapsulinInterProIPR0075441.00infobox
EncapsulinPDBIPR007544 PF04454 (ECOD; PDBsum)1.00infobox
EncapsulinPfamPF044541.00infobox
EncapsulinSymbolLinocin_M181.00infobox
Encapsulinhas applicationEncapsulins0.60section
Encapsulinhas applicationThey0.60section
Encapsulinhas applicationDrug Delivery0.60section
Encapsulinhas applicationEngineered0.60section

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    Min side: 3
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