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CPSF4

Cleavage and polyadenylation specificity factor subunit 4 is a protein that in humans is encoded by the CPSF4 gene.

Measurement & Overview

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Topic orientation

CPSF4 at a glance

ProteinGeneMRNAsInfluenza A virusPolyadenylation

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Explore the main themes, entities and connections around CPSF4. Start with the topic map, then use the sections below for research and deeper semantic analysis.

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Key facts & relationships

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Aliases
CPSF4, CPSF30, NAR, NEB1, NEB-1, cleavage and polyadenylation specific factor 4
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2D9N, 2RHK
Band
7q22.1 · 5|5 G2
Bgee
secondary oocyte · right hemisphere of cerebellum · gastric mucosa · right frontal lobe · left testis
BioGPS
More reference expression data
Chr.
Chromosome 7 (human) · Chromosome 5 (mouse)

Topics to explore

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Overview

Advanced semantic analysis

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How this topic connects Entity context

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CPSF4

Top relations

Gene ontology · 21
CPSF4 → endoribonuclease activity, intracellular membrane-bounded organelle, metal ion binding, modification by virus of host mRNA processing, mRNA 3'-end processing, mRNA cleavage and polyadenylation specificity factor complex, mRNA export from nucleus, mRNA polyadenylation, mRNA processing, mRNA splicing, via spliceosome, nucleic acid binding, nucleoplasm, nucleus, pre-mRNA cleavage required for polyadenylation, protein binding, RNA binding, RNA phosphodiester bond hydrolysis, endonucleolytic, termination of RNA polymerase II transcription, tRNA splicing, via endonucleolytic cleavage and ligation, viral process
Bgee · 20
CPSF4 → blood, body of pancreas, cumulus cell, ectocervix, endothelial cell, epiblast, external carotid artery, gastric mucosa, internal carotid artery, left testis, mandibular prominence, maxillary prominence, right frontal lobe, right hemisphere of cerebellum, right testis, secondary oocyte, somite, spermatocyte, tibial nerve, yolk sac
RNA expression pattern · 20
CPSF4 → blood, body of pancreas, cumulus cell, ectocervix, endothelial cell, epiblast, external carotid artery, gastric mucosa, internal carotid artery, left testis, mandibular prominence, maxillary prominence, right frontal lobe, right hemisphere of cerebellum, right testis, secondary oocyte, somite, spermatocyte, tibial nerve, yolk sac
related to External links · 8
CPSF4 → Cleavage, Human CPSF4, O95639, Overview, PDB, PDBe-KB, UCSC Genome Browser, UniProt
Band · 2
CPSF4 → 5|5 G2, 7q22.1
Chr. · 2
CPSF4 → Chromosome 5 (mouse), Chromosome 7 (human)
End · 2
CPSF4 → 145,118,851 bp, 99,457,373 bp
Aliases · 1
CPSF4 → CPSF4, CPSF30, NAR, NEB1, NEB-1, cleavage and polyadenylation specific factor 4
Available structures · 1
CPSF4 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2D9N, 2RHK
BioGPS · 1
CPSF4 → More reference expression data

Important terminology Word statistics

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Important terminology

polyadenylation protein cleavage gene factor ns1 bp human chr band subunit end chromosome location export cellular specific external mrnas specificity

Entity relationships Subject–Predicate–Object triples

Extracted RDF-like relationships with confidence and source. The table includes structured facts and lower-confidence contextual relations.
SubjectPredicateObjectConfidenceSrc
CPSF4AliasesCPSF4, CPSF30, NAR, NEB1, NEB-1, cleavage and polyadenylation specific factor 41.00infobox
CPSF4Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2D9N, 2RHK1.00infobox
CPSF4Band7q22.11.00infobox
CPSF4Band5|5 G21.00infobox
CPSF4Bgeesecondary oocyte1.00infobox
CPSF4Bgeeright hemisphere of cerebellum1.00infobox
CPSF4Bgeegastric mucosa1.00infobox
CPSF4Bgeeright frontal lobe1.00infobox
CPSF4Bgeeleft testis1.00infobox
CPSF4Bgeeright testis1.00infobox
CPSF4Bgeetibial nerve1.00infobox
CPSF4Bgeeendothelial cell1.00infobox
CPSF4Bgeebody of pancreas1.00infobox
CPSF4Bgeeectocervix1.00infobox
CPSF4Bgeeepiblast1.00infobox
CPSF4Bgeecumulus cell1.00infobox
CPSF4Bgeeyolk sac1.00infobox
CPSF4Bgeeinternal carotid artery1.00infobox
CPSF4Bgeeexternal carotid artery1.00infobox
CPSF4Bgeemandibular prominence1.00infobox
CPSF4Bgeemaxillary prominence1.00infobox
CPSF4Bgeesomite1.00infobox
CPSF4Bgeespermatocyte1.00infobox
CPSF4Bgeeblood1.00infobox
CPSF4BioGPSMore reference expression data1.00infobox
CPSF4Chr.Chromosome 7 (human)1.00infobox
CPSF4Chr.Chromosome 5 (mouse)1.00infobox
CPSF4DatabasesNCBI: entry; OMA: entry1.00infobox
CPSF4End99,457,373 bp1.00infobox
CPSF4End145,118,851 bp1.00infobox

Related concept clusters Concept neighborhoods

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    Connections between topic areas Semantic bridges

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    Map overview Semantic statistics

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    CPSF4

    Nodes9
    Edges8
    Triples92
    Avg. degree1.78
    Density0.222222
    Components1
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