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CHD4: Products, Interactions & Clinical

Chromodomain-helicase-DNA-binding protein 4 is an enzyme that in humans is encoded by the CHD4 gene. CHD4 is the core nucleosome-remodelling component of the Nucleosome Remodelling and Deacetylase (NuRD) complex.

Language: English [EN]
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CHD4 topic overview

The analysis highlights Products, Interactions and Clinical as prominent areas in the source structure around CHD4.

Related topics
15
Source areas
4
Connected nodes
19
Extracted relationships
103
Concept neighborhoods
7
Bridge connections
19

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Interactions · 6 topics
Clinical · 5 topics
Overview · 3 topics
Function · 1 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
CHD4, CHD-4, Mi-2b, Mi2-BETA, chromodomain helicase DNA binding protein 4, SIHIWES
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1MM2, 1MM3, 2EE1, 2L5U, 2L75, 4O9I, 2N5N
Band
12p13.31 · 6 F2|6 59.28 cM
Bgee
ventricular zone · ganglionic eminence · epithelium of colon · right lobe of thyroid gland · anterior pituitary
BioGPS
More reference expression data
Chr.
Chromosome 12 (human) · Chromosome 6 (mouse)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Function

Interactions

Clinical

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How CHD4 connects Entity context

The extracted context around CHD4 shows recurring relationship patterns in the source. For example, CHD4 → ATP binding, centrosome, chromatin organization, cytoplasm, cytoskeleton, DNA binding, DNA duplex unwinding, DNA helicase activity, helicase activity, histone deacetylase activity, histone deacetylase binding, histone deacetylation, hydrolase activity, membrane, metal ion binding, microtubule organizing center, negative regulation of transcription by RNA polymerase II, nucleoplasm, nucleosomal DNA binding, nucleotide binding Another extracted example is CHD4 → anterior pituitary, apex of heart, choroid plexus of fourth ventricle, entorhinal cortex, epithelium of colon, ganglionic eminence, genital tubercle, Ileal epithelium, left lobe of thyroid gland, neural layer of retina, perirhinal cortex, right adrenal cortex, right coronary artery, right lobe of thyroid gland, Rostral migratory stream, sural nerve, tail of embryo, ventricular zone, yolk sac. Use these groups to spot repeated connection types before inspecting the individual relationships.

CHD4

Top relations

Gene ontology · 33
CHD4 → ATP binding, centrosome, chromatin organization, cytoplasm, cytoskeleton, DNA binding, DNA duplex unwinding, DNA helicase activity, helicase activity, histone deacetylase activity, histone deacetylase binding, histone deacetylation, hydrolase activity, membrane, metal ion binding, microtubule organizing center, negative regulation of transcription by RNA polymerase II, nucleoplasm, nucleosomal DNA binding, nucleotide binding
Bgee · 19
CHD4 → anterior pituitary, apex of heart, choroid plexus of fourth ventricle, entorhinal cortex, epithelium of colon, ganglionic eminence, genital tubercle, Ileal epithelium, left lobe of thyroid gland, neural layer of retina, perirhinal cortex, right adrenal cortex, right coronary artery, right lobe of thyroid gland, Rostral migratory stream, sural nerve, tail of embryo, ventricular zone, yolk sac
RNA expression pattern · 19
CHD4 → anterior pituitary, apex of heart, choroid plexus of fourth ventricle, entorhinal cortex, epithelium of colon, ganglionic eminence, genital tubercle, Ileal epithelium, left lobe of thyroid gland, neural layer of retina, perirhinal cortex, right adrenal cortex, right coronary artery, right lobe of thyroid gland, Rostral migratory stream, sural nerve, tail of embryo, ventricular zone, yolk sac
related to Interactions · 6
CHD4 → Ataxia, HDAC1, Histone, MTA2, Rad3, SATB1
Band · 2
CHD4 → 12p13.31, 6 F2|6 59.28 cM
Chr. · 2
CHD4 → Chromosome 12 (human), Chromosome 6 (mouse)
End · 2
CHD4 → 125,107,554 bp, 6,614,524 bp
related to External links · 2
CHD4 → Human CHD4, UCSC Genome Browser
Aliases · 1
CHD4 → CHD4, CHD-4, Mi-2b, Mi2-BETA, chromodomain helicase DNA binding protein 4, SIHIWES
Available structures · 1
CHD4 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1MM2, 1MM3, 2EE1, 2L5U, 2L75, 4O9I, 2N5N

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

gene bp human chr band protein chromosome 12 deacetylase location component complex helicase nurd mouse function external nucleosome dna binding

CHD4 relationships Subject–Predicate–Object triples

TTTA extracted 103 structured relationships around CHD4. Examples in this analysis include CHD4 → Aliases → CHD4, CHD-4, Mi-2b, Mi2-BETA, chromodomain helicase DNA binding protein 4, SIHIWES and CHD4 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1MM2, 1MM3, 2EE1, 2L5U, 2L75, 4O9I, 2N5N. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
CHD4AliasesCHD4, CHD-4, Mi-2b, Mi2-BETA, chromodomain helicase DNA binding protein 4, SIHIWES1.00infobox
CHD4Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1MM2, 1MM3, 2EE1, 2L5U, 2L75, 4O9I, 2N5N1.00infobox
CHD4Band12p13.311.00infobox
CHD4Band6 F2|6 59.28 cM1.00infobox
CHD4Bgeeventricular zone1.00infobox
CHD4Bgeeganglionic eminence1.00infobox
CHD4Bgeeepithelium of colon1.00infobox
CHD4Bgeeright lobe of thyroid gland1.00infobox
CHD4Bgeeanterior pituitary1.00infobox
CHD4Bgeesural nerve1.00infobox
CHD4Bgeeapex of heart1.00infobox
CHD4Bgeeright adrenal cortex1.00infobox
CHD4Bgeeleft lobe of thyroid gland1.00infobox
CHD4Bgeeright coronary artery1.00infobox
CHD4BgeeIleal epithelium1.00infobox
CHD4BgeeRostral migratory stream1.00infobox
CHD4Bgeechoroid plexus of fourth ventricle1.00infobox
CHD4Bgeetail of embryo1.00infobox
CHD4Bgeegenital tubercle1.00infobox
CHD4Bgeeentorhinal cortex1.00infobox
CHD4Bgeeperirhinal cortex1.00infobox
CHD4Bgeeneural layer of retina1.00infobox
CHD4Bgeeyolk sac1.00infobox
CHD4BioGPSMore reference expression data1.00infobox
CHD4Chr.Chromosome 12 (human)1.00infobox
CHD4Chr.Chromosome 6 (mouse)1.00infobox
CHD4DatabasesNCBI: entry; OMA: entry1.00infobox
CHD4End6,614,524 bp1.00infobox
CHD4End125,107,554 bp1.00infobox
CHD4EnsemblENSG000001116421.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around CHD4 bring nearby vocabulary together. In this analysis, examples include Gene, Deacetylase and Location. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • CHD4
    • Gene
    • Deacetylase
    • Location
    • Protein
    • Human
    • Binding
    • Dna
    • Function
    • Heart
    • Helicase
    • Histone
    • Nurd
  • chd4
    • Gene
    • Deacetylase
    • Location
    • Protein
    • Human
    • Binding
    • Dna
    • Function
    • Heart
    • Helicase
    • Histone
    • Nurd
  • gene
    • Location
    • Human
    • Chromosome
    • Protein
    • Bp
    • Chr
    • Binding
    • Condition
    • Dna
    • End
    • F2
    • Function
  • histone deacetylase 2
    • Histone
    • Nucleosome
    • Nurd
    • Mouse
    • Search
    • Ucsc
    • Nucleosome-remodelling
    • Binding
    • Dna
    • End
    • F2
    • Function
  • function
    • Binding
    • Dna
    • Helicase
    • Search
    • Chromosome
    • Location
    • Protein
    • Bp
    • Chr
    • Human
    • End
    • F2
  • enzyme
    • Encoded
    • Humans
    • Protein
    • Gene
  • nurd
    • Search
    • Ucsc
    • Protein

Connections between topic areas Semantic bridges

For CHD4, one of the stronger structural bridges in this analysis connects CHD4 with Interactions. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
CHD4Interactions · splits 13 ⟂ 7
CHD4Clinical · splits 14 ⟂ 6
CHD4Overview · splits 16 ⟂ 4

Map overview Semantic statistics

CHD4

Nodes20
Edges19
Triples103
Avg. degree1.9
Density0.1
Components1

Source & methodology

TTTA analyzes the structure around CHD4 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Products, Interactions & Clinical, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — CHD4 · EN edition · Analysis: TopicsToTalkAbout

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