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AT-hook: Products, Structure & Overview

The AT-hook is a DNA-binding motif present in many proteins, including the high-mobility group (HMG) proteins, DNA-binding proteins from plants and hBRG1 protein, a central ATPase of the human switching/sucrose non-fermenting (SWI/SNF) remodeling complex.

Language: English [EN]
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AT-hook topic overview

The analysis highlights Products, Structure and Overview as prominent areas in the source structure around AT-hook.

Related topics
17
Source areas
2
Connected nodes
19
Extracted relationships
37
Concept neighborhoods
12
Bridge connections
19

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Structure · 10 topics
Overview · 7 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

AlphaFold
IPR017956 · PF02178
Available protein structures:
IPR017956 · PF02178
InterPro
IPR017956
PDB
IPR017956 PF02178 (ECOD; PDBsum)
Pfam
PF02178
SCOP2
2eze / SCOPe / SUPFAM

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Structure

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How AT-hook connects Entity context

The extracted context around AT-hook shows recurring relationship patterns in the source. For example, AT-hook → AAAT, AATT, AT, AT-hooks, ATAA, DNA, DNA-bound AT-hook, HMGA, In, NMR, TATT, The, The AT-hook, The DNA, This, Van, Waals Another extracted example is AT-hook → Arg38, AT-rich DNA, DNA, Gly37, HMG, NH, That, The, The AT-hooks. Use these groups to spot repeated connection types before inspecting the individual relationships.

AT-hook

Top relations

related to Structure · 17
AT-hook → AAAT, AATT, AT, AT-hooks, ATAA, DNA, DNA-bound AT-hook, HMGA, In, NMR, TATT, The, The AT-hook, The DNA, This, Van, Waals
related to Function · 9
AT-hook → Arg38, AT-rich DNA, DNA, Gly37, HMG, NH, That, The, The AT-hooks
AlphaFold · 2
AT-hook → IPR017956, PF02178
Available protein structures: · 2
AT-hook → IPR017956, PF02178
InterPro · 1
AT-hook → IPR017956
PDB · 1
AT-hook → IPR017956 PF02178 (ECOD; PDBsum)
Pfam · 1
AT-hook → PF02178
SCOP2 · 1
AT-hook → 2eze / SCOPe / SUPFAM
SMART · 1
AT-hook → AT_hook
Symbol · 1
AT-hook → AT_hook

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

proteins dna groove minor at-hooks position interactions hmg human complex binding hook protein motif structure core sequence although form many

AT-hook relationships Subject–Predicate–Object triples

TTTA extracted 37 structured relationships around AT-hook. Examples in this analysis include AT-hook → AlphaFold → IPR017956 and AT-hook → AlphaFold → PF02178. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
AT-hookAlphaFoldIPR0179561.00infobox
AT-hookAlphaFoldPF021781.00infobox
AT-hookAvailable protein structures:IPR0179561.00infobox
AT-hookAvailable protein structures:PF021781.00infobox
AT-hookInterProIPR0179561.00infobox
AT-hookPDBIPR017956 PF02178 (ECOD; PDBsum)1.00infobox
AT-hookPfamPF021781.00infobox
AT-hookSCOP22eze / SCOPe / SUPFAM1.00infobox
AT-hookSMARTAT_hook1.00infobox
AT-hookSymbolAT_hook1.00infobox
AT-hookis aDNA-binding motif present in many proteins0.90text
AT-hookrelated to FunctionNH0.60section

Related concept clusters Concept neighborhoods

The concept neighborhoods around AT-hook bring nearby vocabulary together. In this analysis, examples include Minor, Dna and Groove. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • AT-hook
    • Minor
    • Dna
    • Groove
    • Position
    • Aatt
    • Adenines
    • Der
    • Important
    • Play
    • Van
    • Waals
    • Proteins
  • at-hook
    • Minor
    • Dna
    • Groove
    • Position
    • Aatt
    • Adenines
    • Der
    • Important
    • Play
    • Van
    • Waals
    • Proteins
  • complex
    • Human
    • Motif
    • Protein
    • Dna-binding
    • Plants
    • Structure
    • Contain
    • Dodecamer
    • Function
    • Many
    • Nmr
    • Remodeling
  • motif
    • Human
    • Protein
    • Plants
    • Structure
    • Contain
    • Dodecamer
    • Function
    • Nmr
    • Remodeling
    • Although
    • Binding
    • Core
  • human
    • Motif
    • Protein
    • Plants
    • Structure
    • Contain
    • Dodecamer
    • Function
    • Many
    • Nmr
    • Remodeling
    • Although
    • Binding
  • proteins
    • Remodeling
    • Sequences
    • Although
    • Binding
    • Form
    • At-hooks
    • Minor
    • Dna
    • Groove
    • Aatt
    • Also
    • Contain
  • structure
    • Complex
    • Contain
    • Dodecamer
    • Function
    • Human
    • Motif
    • Nmr
    • Protein
    • Although
    • Binding
    • Core
    • Hook
  • minor groove
    • Minor
    • Thymine
    • Form
    • Position
    • Interactions
    • Proteins
    • Aatt
    • Name
    • Nmr
    • Side
    • Hook

Connections between topic areas Semantic bridges

For AT-hook, one of the stronger structural bridges in this analysis connects AT-hook with Structure. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
AT-hookStructure · splits 9 ⟂ 11
AT-hookOverview · splits 12 ⟂ 8

Map overview Semantic statistics

AT-hook

Nodes20
Edges19
Triples37
Avg. degree1.9
Density0.1
Components1

Source & methodology

TTTA analyzes the structure around AT-hook to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Products, Structure & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — AT-hook · EN edition · Analysis: TopicsToTalkAbout

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