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Structural variation

Genomic structural variation is the variation in structure of an organism's chromosome, such as deletions, duplications, copy-number variants, insertions, inversions and translocations. Originally, a structure variation affects a sequence length about 1kb to 3Mb, which is larger than SNPs and smaller than chromosome abnormality (though the definitions…

Sub-microscopic structural variation, Copy-number variation & Inversion

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Overview

Microscopic structural variation

Sub-microscopic structural variation

Copy-number variation

Inversion

Other structural variants

Structural variation and phenotypes

Database of structural variation

Methods of detection

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Map overview Semantic statistics

Structural variation

Nodes61
Edges60
Triples59
Avg. degree1.97
Density0.032787
Components1

How this topic connects Entity context

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Structural variation

Top relations

related to Copy-number variation · 12
Structural variation → Also, Because CNVs, CNV, CNVs, Copy-number, In, It, LINEs, Results, SINEs, Single Nucleotide Polymorphism, SNP
related to Database of structural variation · 11
Structural variation → CNVs, Common Cell CNVs, In, LOH, On NCBI, Some, Structural Var, The, UCSC Genome Browser, Under, UPD
has method · 10
Structural variation → An SNP, DNA, For, For Genome, From, New, PCR, The, These, This
related to Structural variation and phenotypes · 9
Structural variation → AIDS, Also, CNVs, Different, Inherited, It, Some, Structural, There
related to Other structural variants · 6
Structural variation → More, Other, PCR-based, The, There, UPD
related to Sub-microscopic structural variation · 6
Structural variation → DNA, However, It, Sub-microscopic, The, These
is a · 1
Structural variation → variation in structure of an organism's chromosome
see also · 1
Structural variation → Structural

Important terminology Word statistics

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Important terminology

structural variation variants genome also duplications deletions methods human genetic inversions sequence insertions chromosome variations cnvs read include however inversion

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
Structural variationis avariation in structure of an organism's chromosome0.90text
LINEsinstance ofwidespread similar sequences0.80text
SINEs may be a common mechanism of CNV creationinstance ofwidespread similar sequences0.80text
insertions that escape detection when using other methodsinstance oflong read based genome assemblies offer structural variation discovery for classes0.80text
Structural variationhas methodNew0.60section
Structural variationhas methodThe0.60section
Structural variationhas methodFor Genome0.60section
Structural variationhas methodThese0.60section
Structural variationhas methodDNA0.60section
Structural variationhas methodThis0.60section
Structural variationhas methodFor0.60section
Structural variationhas methodPCR0.60section

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