SOCS6

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Overview

Protein Gene SH2 domain Cytokine Suppressor of cytokine signaling

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Key facts & relationships

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Aliases: SOCS6, CIS-4, CIS4, HSPC060, SOCS-4, SOCS-6, SOCS4, SSI4, STAI4, STATI4, suppressor of cytokine signaling 6
Available structures: Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2VIF
Band: 18q22.2 · 18|18 E4
Bgee: mucosa of paranasal sinus · biceps brachii · Skeletal muscle tissue of rectus abdominis · jejunal mucosa · oral cavity
BioGPS: More reference expression data
Chr.: Chromosome 18 (human) · Chromosome 18 (mouse)

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Overview

Advanced semantic analysis

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Map overview Semantic statistics

Nodes15

Edges14

Triples84

Avg. degree1.87

Density0.133333

Components1

How this topic connects Entity context

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SOCS6

Top relations

Gene ontology · 21

SOCS6 → 1-phosphatidylinositol-3-kinase regulator activity, cytokine-mediated signaling pathway, cytoplasm, cytosol, defense response, immunological synapse, intracellular signal transduction, negative regulation of protein kinase activity, negative regulation of receptor signaling pathway via JAK-STAT, negative regulation of signal transduction, negative regulation of T cell activation, phosphatidylinositol 3-kinase complex, phosphatidylinositol phosphate biosynthetic process, post-translational protein modification, proteasomal protein catabolic process, protein binding, protein kinase inhibitor activity, protein ubiquitination, receptor signaling pathway via JAK-STAT, regulation of growth

Bgee · 20

SOCS6 → biceps brachii, caput epididymis, intercostal muscle, jejunal mucosa, medial geniculate nucleus, mucosa of colon, mucosa of paranasal sinus, mucosa of sigmoid colon, oral cavity, otic placode, otic vesicle, pineal gland, right ventricle, saccule, secondary oocyte, Skeletal muscle tissue of biceps brachii, Skeletal muscle tissue of rectus abdominis, soleus muscle, yolk sac, zygote

RNA expression pattern · 20

Band · 2

SOCS6 → 18q22.2, 18|18 E4

Chr. · 2

SOCS6 → Chromosome 18 (human), Chromosome 18 (mouse)

End · 2

SOCS6 → 70,330,199 bp, 88,945,605 bp

Aliases · 1

SOCS6 → SOCS6, CIS-4, CIS4, HSPC060, SOCS-4, SOCS-6, SOCS4, SSI4, STAI4, STATI4, suppressor of cytokine signaling 6

Available structures · 1

SOCS6 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2VIF

BioGPS · 1

SOCS6 → More reference expression data

Databases · 1

SOCS6 → NCBI: entry; OMA: entry

Important terminology Word statistics

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Important terminology

gene signaling bp cytokine protein chr human band chromosome 18 cis suppressor expression location encoded known family mouse inhibitor negative

Entity relationships Subject–Predicate–Object triples

Subject	Predicate	Object	Confidence	Src
SOCS6	Aliases	SOCS6, CIS-4, CIS4, HSPC060, SOCS-4, SOCS-6, SOCS4, SSI4, STAI4, STATI4, suppressor of cytokine signaling 6	1.00	infobox
SOCS6	Available structures	Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2VIF	1.00	infobox
SOCS6	Band	18q22.2	1.00	infobox
SOCS6	Band	18\|18 E4	1.00	infobox
SOCS6	Bgee	mucosa of paranasal sinus	1.00	infobox
SOCS6	Bgee	biceps brachii	1.00	infobox
SOCS6	Bgee	Skeletal muscle tissue of rectus abdominis	1.00	infobox
SOCS6	Bgee	jejunal mucosa	1.00	infobox
SOCS6	Bgee	oral cavity	1.00	infobox
SOCS6	Bgee	mucosa of colon	1.00	infobox
SOCS6	Bgee	mucosa of sigmoid colon	1.00	infobox
SOCS6	Bgee	Skeletal muscle tissue of biceps brachii	1.00	infobox
SOCS6	Bgee	right ventricle	1.00	infobox
SOCS6	Bgee	caput epididymis	1.00	infobox
SOCS6	Bgee	otic vesicle	1.00	infobox
SOCS6	Bgee	otic placode	1.00	infobox
SOCS6	Bgee	zygote	1.00	infobox
SOCS6	Bgee	saccule	1.00	infobox
SOCS6	Bgee	secondary oocyte	1.00	infobox
SOCS6	Bgee	pineal gland	1.00	infobox
SOCS6	Bgee	yolk sac	1.00	infobox
SOCS6	Bgee	intercostal muscle	1.00	infobox
SOCS6	Bgee	soleus muscle	1.00	infobox
SOCS6	Bgee	medial geniculate nucleus	1.00	infobox
SOCS6	BioGPS	More reference expression data	1.00	infobox
SOCS6	Chr.	Chromosome 18 (human)	1.00	infobox
SOCS6	Chr.	Chromosome 18 (mouse)	1.00	infobox
SOCS6	Databases	NCBI: entry; OMA: entry	1.00	infobox
SOCS6	End	70,330,199 bp	1.00	infobox
SOCS6	End	88,945,605 bp	1.00	infobox

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