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SEC13: Overview, Related Topics & Entities

Protein SEC13 homolog is a protein that in humans is encoded by the SEC13 gene.

Language: English [EN]
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SEC13 topic overview

The analysis highlights Overview, Related Topics and Entities as prominent areas in the source structure around SEC13.

Related topics
6
Source areas
1
Connected nodes
7
Extracted relationships
106
Concept neighborhoods
8
Bridge connections
7

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Overview · 6 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
SEC13, D3S1231E, SEC13L1, SEC13R, npp-20, SEC13 homolog, nuclear pore and COPII coat complex component
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3BG0, 3BG1, 5A9Q
Band
3p25.3 · 6 E3|6 52.84 cM
Bgee
stromal cell of endometrium · oocyte · pituitary gland · beta cell · anterior pituitary
BioGPS
More reference expression data
Chr.
Chromosome 3 (human) · Chromosome 6 (mouse)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How SEC13 connects Entity context

The extracted context around SEC13 shows recurring relationship patterns in the source. For example, SEC13 → antigen processing and presentation of exogenous peptide antigen via MHC class II, antigen processing and presentation of peptide antigen via MHC class I, COPII vesicle coat, COPII vesicle coating, COPII-coated vesicle budding, COPII-coated vesicle cargo loading, cytoplasmic vesicle, cytosol, endoplasmic reticulum, endoplasmic reticulum membrane, ER to Golgi transport vesicle membrane, extracellular exosome, GATOR2 complex, Golgi membrane, host cell, identical protein binding, intracellular membrane-bounded organelle, intracellular protein transport, intracellular transport of virus, kinetochore Another extracted example is SEC13 → anterior pituitary, beta cell, cartilage tissue, duodenum, endocardial cushion, epithelium of small intestine, Ileal epithelium, jejunal mucosa, mandibular prominence, maxillary prominence, molar, neural tube, oocyte, otic placode, parotid gland, pituitary gland, seminal vesicula, stromal cell of endometrium, tibia. Use these groups to spot repeated connection types before inspecting the individual relationships.

SEC13

Top relations

Gene ontology · 45
SEC13 → antigen processing and presentation of exogenous peptide antigen via MHC class II, antigen processing and presentation of peptide antigen via MHC class I, COPII vesicle coat, COPII vesicle coating, COPII-coated vesicle budding, COPII-coated vesicle cargo loading, cytoplasmic vesicle, cytosol, endoplasmic reticulum, endoplasmic reticulum membrane, ER to Golgi transport vesicle membrane, extracellular exosome, GATOR2 complex, Golgi membrane, host cell, identical protein binding, intracellular membrane-bounded organelle, intracellular protein transport, intracellular transport of virus, kinetochore
Bgee · 19
SEC13 → anterior pituitary, beta cell, cartilage tissue, duodenum, endocardial cushion, epithelium of small intestine, Ileal epithelium, jejunal mucosa, mandibular prominence, maxillary prominence, molar, neural tube, oocyte, otic placode, parotid gland, pituitary gland, seminal vesicula, stromal cell of endometrium, tibia
RNA expression pattern · 19
SEC13 → anterior pituitary, beta cell, cartilage tissue, duodenum, endocardial cushion, epithelium of small intestine, Ileal epithelium, jejunal mucosa, mandibular prominence, maxillary prominence, molar, neural tube, oocyte, otic placode, parotid gland, pituitary gland, seminal vesicula, stromal cell of endometrium, tibia
Band · 2
SEC13 → 3p25.3, 6 E3|6 52.84 cM
Chr. · 2
SEC13 → Chromosome 3 (human), Chromosome 6 (mouse)
End · 2
SEC13 → 10,321,112 bp, 113,717,704 bp
Aliases · 1
SEC13 → SEC13, D3S1231E, SEC13L1, SEC13R, npp-20, SEC13 homolog, nuclear pore and COPII coat complex component
Available structures · 1
SEC13 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3BG0, 3BG1, 5A9Q
BioGPS · 1
SEC13 → More reference expression data
Databases · 1
SEC13 → NCBI: entry; OMA: entry

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

gene bp chr human band protein chromosome location encoded proteins vesicle transport mouse homolog endoplasmic reticulum nuclear pore copii coat

SEC13 relationships Subject–Predicate–Object triples

TTTA extracted 106 structured relationships around SEC13. Examples in this analysis include SEC13 → Aliases → SEC13, D3S1231E, SEC13L1, SEC13R, npp-20, SEC13 homolog, nuclear pore and COPII coat complex component and SEC13 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3BG0, 3BG1, 5A9Q. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
SEC13AliasesSEC13, D3S1231E, SEC13L1, SEC13R, npp-20, SEC13 homolog, nuclear pore and COPII coat complex component1.00infobox
SEC13Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3BG0, 3BG1, 5A9Q1.00infobox
SEC13Band3p25.31.00infobox
SEC13Band6 E3|6 52.84 cM1.00infobox
SEC13Bgeestromal cell of endometrium1.00infobox
SEC13Bgeeoocyte1.00infobox
SEC13Bgeepituitary gland1.00infobox
SEC13Bgeebeta cell1.00infobox
SEC13Bgeeanterior pituitary1.00infobox
SEC13Bgeeduodenum1.00infobox
SEC13Bgeejejunal mucosa1.00infobox
SEC13Bgeeparotid gland1.00infobox
SEC13Bgeecartilage tissue1.00infobox
SEC13Bgeetibia1.00infobox
SEC13Bgeemolar1.00infobox
SEC13Bgeeepithelium of small intestine1.00infobox
SEC13Bgeeseminal vesicula1.00infobox
SEC13Bgeeotic placode1.00infobox
SEC13BgeeIleal epithelium1.00infobox
SEC13Bgeemandibular prominence1.00infobox
SEC13Bgeemaxillary prominence1.00infobox
SEC13Bgeeendocardial cushion1.00infobox
SEC13Bgeeneural tube1.00infobox
SEC13BioGPSMore reference expression data1.00infobox
SEC13Chr.Chromosome 3 (human)1.00infobox
SEC13Chr.Chromosome 6 (mouse)1.00infobox
SEC13DatabasesNCBI: entry; OMA: entry1.00infobox
SEC13End10,321,112 bp1.00infobox
SEC13End113,717,704 bp1.00infobox
SEC13EnsemblENSG000001570201.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around SEC13 bring nearby vocabulary together. In this analysis, examples include Coat, Complex and Component. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • SEC13
    • Coat
    • Complex
    • Component
    • Copii
    • Endoplasmic
    • Nuclear
    • Pore
    • Proteins
    • Reticulum
    • Search
    • Transport
    • Vesicle
  • sec13
    • Coat
    • Complex
    • Component
    • Copii
    • Endoplasmic
    • Nuclear
    • Pore
    • Proteins
    • Reticulum
    • Search
    • Transport
    • Vesicle
  • protein
    • Encoded
    • Gene
    • Sec13
    • Belongs
    • Family
    • Humans
    • Wd-repeat
    • Coat
    • Complex
    • Component
    • Copii
    • E3
  • gene
    • Sec13
    • Location
    • Protein
    • Chromosome
    • Human
    • Bp
    • Chr
    • Coat
    • Complex
    • Component
    • Copii
    • E3
  • endoplasmic reticulum
    • Reticulum
    • Transport
    • Vesicle
    • Sec31
    • Similarity
    • Yeast
    • Sec13
    • Coat
    • Complex
    • Component
    • Copii
    • E3
  • vesicle
    • Transport
    • Yeast
    • Coat
    • Complex
    • Component
    • Copii
    • E3
    • End
    • Mouse
    • Nuclear
    • Pore
    • Search
  • wd-repeat
    • Belongs
    • Family
    • Encoded
    • Proteins
    • Protein
    • Gene
    • Sec13
  • sec31
    • Similarity
    • Yeast
    • Endoplasmic
    • Reticulum
    • Transport
    • Vesicle

Connections between topic areas Semantic bridges

Bridges highlight paths between different parts of the SEC13 map and can reveal research angles that are easy to miss in a flat list.

Min side: 3

Map overview Semantic statistics

SEC13

Nodes8
Edges7
Triples106
Avg. degree1.75
Density0.25
Components1

Source & methodology

TTTA analyzes the structure around SEC13 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Overview, Related Topics & Entities, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — SEC13 · EN edition · Analysis: TopicsToTalkAbout

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