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SEC13

Protein SEC13 homolog is a protein that in humans is encoded by the SEC13 gene.

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Aliases
SEC13, D3S1231E, SEC13L1, SEC13R, npp-20, SEC13 homolog, nuclear pore and COPII coat complex component
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3BG0, 3BG1, 5A9Q
Band
3p25.3 · 6 E3|6 52.84 cM
Bgee
stromal cell of endometrium · oocyte · pituitary gland · beta cell · anterior pituitary
BioGPS
More reference expression data
Chr.
Chromosome 3 (human) · Chromosome 6 (mouse)

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Overview

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Map overview Semantic statistics

SEC13

Nodes8
Edges7
Triples106
Avg. degree1.75
Density0.25
Components1

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SEC13

Top relations

Gene ontology · 45
SEC13 → antigen processing and presentation of exogenous peptide antigen via MHC class II, antigen processing and presentation of peptide antigen via MHC class I, COPII vesicle coat, COPII vesicle coating, COPII-coated vesicle budding, COPII-coated vesicle cargo loading, cytoplasmic vesicle, cytosol, endoplasmic reticulum, endoplasmic reticulum membrane, ER to Golgi transport vesicle membrane, extracellular exosome, GATOR2 complex, Golgi membrane, host cell, identical protein binding, intracellular membrane-bounded organelle, intracellular protein transport, intracellular transport of virus, kinetochore
Bgee · 19
SEC13 → anterior pituitary, beta cell, cartilage tissue, duodenum, endocardial cushion, epithelium of small intestine, Ileal epithelium, jejunal mucosa, mandibular prominence, maxillary prominence, molar, neural tube, oocyte, otic placode, parotid gland, pituitary gland, seminal vesicula, stromal cell of endometrium, tibia
RNA expression pattern · 19
SEC13 → anterior pituitary, beta cell, cartilage tissue, duodenum, endocardial cushion, epithelium of small intestine, Ileal epithelium, jejunal mucosa, mandibular prominence, maxillary prominence, molar, neural tube, oocyte, otic placode, parotid gland, pituitary gland, seminal vesicula, stromal cell of endometrium, tibia
Band · 2
SEC13 → 3p25.3, 6 E3|6 52.84 cM
Chr. · 2
SEC13 → Chromosome 3 (human), Chromosome 6 (mouse)
End · 2
SEC13 → 10,321,112 bp, 113,717,704 bp
Aliases · 1
SEC13 → SEC13, D3S1231E, SEC13L1, SEC13R, npp-20, SEC13 homolog, nuclear pore and COPII coat complex component
Available structures · 1
SEC13 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3BG0, 3BG1, 5A9Q
BioGPS · 1
SEC13 → More reference expression data
Databases · 1
SEC13 → NCBI: entry; OMA: entry

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Important terminology

gene bp chr human band protein chromosome location encoded proteins vesicle transport mouse homolog endoplasmic reticulum nuclear pore copii coat

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
SEC13AliasesSEC13, D3S1231E, SEC13L1, SEC13R, npp-20, SEC13 homolog, nuclear pore and COPII coat complex component1.00infobox
SEC13Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3BG0, 3BG1, 5A9Q1.00infobox
SEC13Band3p25.31.00infobox
SEC13Band6 E3|6 52.84 cM1.00infobox
SEC13Bgeestromal cell of endometrium1.00infobox
SEC13Bgeeoocyte1.00infobox
SEC13Bgeepituitary gland1.00infobox
SEC13Bgeebeta cell1.00infobox
SEC13Bgeeanterior pituitary1.00infobox
SEC13Bgeeduodenum1.00infobox
SEC13Bgeejejunal mucosa1.00infobox
SEC13Bgeeparotid gland1.00infobox
SEC13Bgeecartilage tissue1.00infobox
SEC13Bgeetibia1.00infobox
SEC13Bgeemolar1.00infobox
SEC13Bgeeepithelium of small intestine1.00infobox
SEC13Bgeeseminal vesicula1.00infobox
SEC13Bgeeotic placode1.00infobox
SEC13BgeeIleal epithelium1.00infobox
SEC13Bgeemandibular prominence1.00infobox
SEC13Bgeemaxillary prominence1.00infobox
SEC13Bgeeendocardial cushion1.00infobox
SEC13Bgeeneural tube1.00infobox
SEC13BioGPSMore reference expression data1.00infobox
SEC13Chr.Chromosome 3 (human)1.00infobox
SEC13Chr.Chromosome 6 (mouse)1.00infobox
SEC13DatabasesNCBI: entry; OMA: entry1.00infobox
SEC13End10,321,112 bp1.00infobox
SEC13End113,717,704 bp1.00infobox
SEC13EnsemblENSG000001570201.00infobox

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