RNF168

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Overview

Protein Gene E3 ubiquitin ligase RING finger domain Double-strand breaks

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Key facts & relationships

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2.3.2.27: ↗
Aliases: RNF168, hring finger protein 168, RIDL
Available structures: Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3L11, 4GB0
Band: 3q29 · 16|16 B2
Bgee: sperm · tendon of biceps brachii · pancreatic epithelial cell · parietal pleura · visceral pleura
BioGPS: n/a

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Overview

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Map overview Semantic statistics

Nodes9

Edges8

Triples98

Avg. degree1.78

Density0.222222

Components1

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RNF168

Top relations

Gene ontology · 33

RNF168 → cellular response to DNA damage stimulus, chromatin binding, chromatin organization, cytosol, DNA repair, double-strand break repair, double-strand break repair via nonhomologous end joining, histone binding, histone H2A K63-linked ubiquitination, histone H2A monoubiquitination, histone H2A ubiquitination, histone H2A-K13 ubiquitination, histone H2A-K15 ubiquitination, interstrand cross-link repair, isotype switching, K63-linked polyubiquitin modification-dependent protein binding, metal ion binding, negative regulation of transcription elongation from RNA polymerase II promoter, nucleoplasm, nucleosome binding

Bgee · 20

RNF168 → Achilles tendon, cardiac muscle tissue of right atrium, epithelium of nasopharynx, facial motor nucleus, genital tubercle, germinal epithelium, gonad, hand, otic vesicle, pancreatic epithelial cell, Paneth cell, parietal pleura, primary oocyte, secondary oocyte, sperm, substantia nigra, tail of embryo, tendon of biceps brachii, visceral pleura, zygote

RNA expression pattern · 20

Band · 2

RNF168 → 16|16 B2, 3q29

Chr. · 2

RNF168 → Chromosome 16 (mouse), Chromosome 3 (human)

End · 2

RNF168 → 196,503,768 bp, 32,120,252 bp

2.3.2.27 · 1

RNF168 → ↗

Aliases · 1

RNF168 → RNF168, hring finger protein 168, RIDL

Available structures · 1

RNF168 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3L11, 4GB0

BioGPS · 1

RNF168 → n/a

Important terminology Word statistics

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Important terminology

gene protein bp chr human band chromosome finger location ring involved repair mouse 168 ubiquitin ligase double-strand domain search activity

Entity relationships Subject–Predicate–Object triples

Subject	Predicate	Object	Confidence	Src
RNF168	2.3.2.27	↗	1.00	infobox
RNF168	Aliases	RNF168, hring finger protein 168, RIDL	1.00	infobox
RNF168	Available structures	Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes3L11, 4GB0	1.00	infobox
RNF168	Band	3q29	1.00	infobox
RNF168	Band	16\|16 B2	1.00	infobox
RNF168	Bgee	sperm	1.00	infobox
RNF168	Bgee	tendon of biceps brachii	1.00	infobox
RNF168	Bgee	pancreatic epithelial cell	1.00	infobox
RNF168	Bgee	parietal pleura	1.00	infobox
RNF168	Bgee	visceral pleura	1.00	infobox
RNF168	Bgee	Achilles tendon	1.00	infobox
RNF168	Bgee	epithelium of nasopharynx	1.00	infobox
RNF168	Bgee	germinal epithelium	1.00	infobox
RNF168	Bgee	gonad	1.00	infobox
RNF168	Bgee	cardiac muscle tissue of right atrium	1.00	infobox
RNF168	Bgee	zygote	1.00	infobox
RNF168	Bgee	secondary oocyte	1.00	infobox
RNF168	Bgee	genital tubercle	1.00	infobox
RNF168	Bgee	primary oocyte	1.00	infobox
RNF168	Bgee	Paneth cell	1.00	infobox
RNF168	Bgee	hand	1.00	infobox
RNF168	Bgee	otic vesicle	1.00	infobox
RNF168	Bgee	tail of embryo	1.00	infobox
RNF168	Bgee	substantia nigra	1.00	infobox
RNF168	Bgee	facial motor nucleus	1.00	infobox
RNF168	BioGPS	n/a	1.00	infobox
RNF168	Chr.	Chromosome 3 (human)	1.00	infobox
RNF168	Chr.	Chromosome 16 (mouse)	1.00	infobox
RNF168	Databases	NCBI: entry; OMA: entry	1.00	infobox
RNF168	End	196,503,768 bp	1.00	infobox

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