PomBase

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PomBase topic overview

The analysis highlights Community and Products as prominent areas in the source structure around PomBase.

Related topics: 15
Source areas: 6
Connected nodes: 21
Extracted relationships: 27
Related term clusters: 16
Bridge connections: 21

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Data Curation and Quality Control · 4 topics

Overview · 4 topics

Data Organization · 3 topics

Documentation · 2 topics

Community co-Curation · 1 topics

Knowledgebase Updates · 1 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Authors: Antonia Lock, Midori A Harris, Manuel Lera-Ramírez, Pascal Carme, Kim Rutherford, Juan Mata, Jürg Bähler, Steve Oliver, Valerie Wood
Bookmarkable entities: Yes
Curation policy: Professionally and community curated
Data types captured: Molecular Function, Biological Process, Cellular Component, Phenotype, Genotype, Allele, Protein Modification, Gene Expression, Protein expression, Nucleotide Sequence, RNA sequ…
Description: The scientific resource for Schizosaccharomyces pombe
Download URL: Downloads

Start with your topic. Discover where to go next.

Explore different angles and find fresh ideas to shape your next piece of content.

PomBase

4Model organism database · Fission yeast · Schizosaccharomyces pombe

11NcRNA · Alleles · Genotypes

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Data Curation and Quality Control

Data Organization

Community co-Curation

Canto (gene curation tool)

Knowledgebase Updates

Nucleic Acids Research

Documentation

For the semantics nerds

You can skip this section if you’re here for content ideas and keyword inspiration.

Advanced semantic analysis

How PomBase connects Entity context

The extracted context around PomBase shows recurring relationship patterns in the source. For example, PomBase → Developments, Eukaryotic Genomic Databases, FAQ, Methods, NAR Database Issue, Protocols, Usage Another extracted example is PomBase → Canto, Community. Use these groups to spot repeated connection types before inspecting the individual relationships.

Top relations

related to Documentation · 7

PomBase → Developments, Eukaryotic Genomic Databases, FAQ, Methods, NAR Database Issue, Protocols, Usage

related to Community co-Curation · 2

PomBase → Canto, Community

related to Gene Characterization Status · 2

PomBase → Remarkably, The GO

related to Knowledgebase Updates · 2

PomBase → News, Nucleic Acids Research

Authors · 1

PomBase → Antonia Lock, Midori A Harris, Manuel Lera-Ramírez, Pascal Carme, Kim Rutherford, Juan Mata, Jürg Bähler, Steve Oliver, Valerie Wood

Bookmarkable entities · 1

PomBase → Yes

Curation policy · 1

PomBase → Professionally and community curated

Data types captured · 1

PomBase → Molecular Function, Biological Process, Cellular Component, Phenotype, Genotype, Allele, Protein Modification, Gene Expression, Protein expression, Nucleotide Sequence, RNA sequ…

Description · 1

PomBase → The scientific resource for Schizosaccharomyces pombe

Download URL · 1

PomBase → Downloads

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

yeast data fission curated genome gene community research pombe sequence features curation genes manually protein human biological annotations proteins organism

PomBase relationships Subject–Predicate–Object triples

TTTA extracted 27 structured relationships around PomBase. Examples in this analysis include PomBase → Authors → Antonia Lock, Midori A Harris, Manuel Lera-Ramírez, Pascal Carme, Kim Rutherford, Juan Mata, Jürg Bähler, Steve Oliver, Valerie Wood and PomBase → Bookmarkable entities → Yes. The table shows each extracted connection, where it came from and its confidence.

Subject	Predicate	Object	Confidence	Src
PomBase	Authors	Antonia Lock, Midori A Harris, Manuel Lera-Ramírez, Pascal Carme, Kim Rutherford, Juan Mata, Jürg Bähler, Steve Oliver, Valerie Wood	1.00	infobox
PomBase	Bookmarkable entities	Yes	1.00	infobox
PomBase	Curation policy	Professionally and community curated	1.00	infobox
PomBase	Data types captured	Molecular Function, Biological Process, Cellular Component, Phenotype, Genotype, Allele, Protein Modification, Gene Expression, Protein expression, Nucleotide Sequence, RNA sequ…	1.00	infobox
PomBase	Description	The scientific resource for Schizosaccharomyces pombe	1.00	infobox
PomBase	Download URL	Downloads	1.00	infobox
PomBase	License	Creative Commons Attribution 4.0 International license, GNU General Public License, MIT License	1.00	infobox
PomBase	Organisms	Schizosaccharomyces pombe	1.00	infobox
PomBase	Primary citation	Carme, et al (2026)	1.00	infobox
PomBase	Release date	2011	1.00	infobox
PomBase	Research center	University of Cambridge and University College London	1.00	infobox
PomBase	Website	pombase.org	1.00	infobox
PomBase	is a	model organism database that provides online access to the fission yeast Schizosaccharomyces pombe genome sequence and annotated features	0.90	text

Related concept clusters Related term clusters

The concept neighborhoods around PomBase bring nearby vocabulary together. In this analysis, examples include Fission, Yeast and Community. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

PomBase
- Fission
- Yeast
- Community
- Research
- Curation
- Features
- Gene-specific
- Genome
- Pombe
- Provides
- Sequence
- Using
pombase
- Fission
- Yeast
- Community
- Research
- Curation
- Features
- Gene-specific
- Genome
- Pombe
- Provides
- Sequence
- Using
model organism database
- Pombe
- Data
- Functional
- Organism
- Schizosaccharomyces
- Wide
- Curated
- Features
- Gene-specific
- Genome
- Manually
- Provides
fission yeast
- Fission
- Yeast
- Features
- Gene-specific
- Sequence
- Genes
- Uncharacterized
- Pombase
- Proteins
- Research
- Biological
- Cellular
genome
- Data
- Functional
- Schizosaccharomyces
- Wide
- Curated
- Datasets
- Features
- Gene-specific
- Manually
- Organism
- Pombe
- Sequence
gene ontology
- Either
- Genes
- Specific
- Gene-specific
- Protein
- Sequence
- Using
- Human
- Schizosaccharomyces
- Website
- Wide
- Yeast
biological
- Cellular
- Either
- Features
- Gene
- Gene-specific
- Protein
- Sequence
- Using
- Genes
- Data
- Fission
- Functional
model organism
- Pombe
- Data
- Functional
- Organism
- Schizosaccharomyces
- Wide
- Curated
- Features
- Gene-specific
- Genome
- Manually
- Sequence

Connections between topic areas Semantic bridges

For PomBase, one of the stronger structural bridges in this analysis connects PomBase with Overview. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3

PomBase — Overview · splits 17 ⟂ 5

PomBase — Data Curation and Quality Control · splits 17 ⟂ 5

PomBase — Data Organization · splits 18 ⟂ 4

PomBase — Documentation · splits 19 ⟂ 3

Map overview Semantic statistics

PomBase

Nodes22

Edges21

Triples27

Avg. degree1.91

Density0.090909

Components1

Source & methodology

TTTA analyzes the structure around PomBase to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Community & Products, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — PomBase · EN edition · Analysis: TopicsToTalkAbout

PomBase: Community & Products

PomBase topic overview

What this topic covers Research coverage

Key facts & relationships

Start with your topic. Discover where to go next.

Questions to explore

Explore all related topics Closing gaps

Overview

Data Curation and Quality Control

Data Organization

Community co-Curation

Knowledgebase Updates

Documentation

For the semantics nerds

Advanced semantic analysis

How PomBase connects Entity context

PomBase

Top relations

Important terminology

Important terminology

PomBase relationships Subject–Predicate–Object triples

Related concept clusters Related term clusters

Connections between topic areas Semantic bridges

Map overview Semantic statistics

PomBase

Source & methodology