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PHF8: Clinical significance, Function & Overview

PHD finger protein 8 is a protein that in humans is encoded by the PHF8 gene.

Language: English [EN]
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PHF8 topic overview

The analysis highlights Clinical significance, Function and Overview as prominent areas in the source structure around PHF8.

Related topics
23
Source areas
3
Connected nodes
26
Extracted relationships
121
Concept neighborhoods
15
Bridge connections
26

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Clinical significance · 19 topics
Function · 2 topics
Overview · 2 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

1.14.11.65
Aliases
PHF8, JHDM1F, MRXSSD, ZNF422, PHD finger protein 8, KDM7B
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes4DO0, 3K3O, 2WWU, 3K3N, 3KV4,%%s2WWU, 3K3N, 3K3O, 3KV4, 4DO0
Band
Xp11.22 · X|X F3
Bgee
right testis · sural nerve · left testis · testicle · tendon of biceps brachii
BioGPS
n/a

Suggested research paths

A focused starting point derived from the topic graph, ranked independently of the source article order.

Start with these areas

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Function

Clinical significance

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How PHF8 connects Entity context

The extracted context around PHF8 shows recurring relationship patterns in the source. For example, PHF8 → 2-oxoglutarate-dependent dioxygenase activity, brain development, cell cycle, chromatin binding, chromatin organization, dioxygenase activity, G1/S transition of mitotic cell cycle, histone demethylase activity, histone H3-K27 demethylation, histone H3-K36 demethylation, histone H3-K9 demethylation, histone H3-methyl-lysine-36 demethylase activity, histone H3-methyl-lysine-9 demethylase activity, histone H3-tri/di-methyl-lysine-27 demethylase activity, histone H4-K20 demethylation, histone H4-methyl-lysine-20 demethylase activity, iron ion binding, metal ion binding, methylated histone binding, negative regulation of ribosomal DNA heterochromatin assembly Another extracted example is PHF8 → Achilles tendon, blood, epithelium of colon, gonad, Gonadal ridge, granulocyte, left testis, medial ganglionic eminence, otic placode, otic vesicle, primary oocyte, right lobe of liver, right testis, right uterine tube, saccule, secondary oocyte, sural nerve, tendon of biceps brachii, testicle, zygote. Use these groups to spot repeated connection types before inspecting the individual relationships.

PHF8

Top relations

Gene ontology · 31
PHF8 → 2-oxoglutarate-dependent dioxygenase activity, brain development, cell cycle, chromatin binding, chromatin organization, dioxygenase activity, G1/S transition of mitotic cell cycle, histone demethylase activity, histone H3-K27 demethylation, histone H3-K36 demethylation, histone H3-K9 demethylation, histone H3-methyl-lysine-36 demethylase activity, histone H3-methyl-lysine-9 demethylase activity, histone H3-tri/di-methyl-lysine-27 demethylase activity, histone H4-K20 demethylation, histone H4-methyl-lysine-20 demethylase activity, iron ion binding, metal ion binding, methylated histone binding, negative regulation of ribosomal DNA heterochromatin assembly
Bgee · 20
PHF8 → Achilles tendon, blood, epithelium of colon, gonad, Gonadal ridge, granulocyte, left testis, medial ganglionic eminence, otic placode, otic vesicle, primary oocyte, right lobe of liver, right testis, right uterine tube, saccule, secondary oocyte, sural nerve, tendon of biceps brachii, testicle, zygote
RNA expression pattern · 20
PHF8 → Achilles tendon, blood, epithelium of colon, gonad, Gonadal ridge, granulocyte, left testis, medial ganglionic eminence, otic placode, otic vesicle, primary oocyte, right lobe of liver, right testis, right uterine tube, saccule, secondary oocyte, sural nerve, tendon of biceps brachii, testicle, zygote
related to Clinical significance · 15
PHF8 → FAM120C, Finnish, In, JmjC, Mutations, OMIM, Siderius, Siderius-Hamel, Siderius-type XLMR, The F279S, This, WNK3, X-linked, XLMR, Xp11
related to External links · 6
PHF8 → Medicine, Medicine Medical Subject Headings, MeSH, National Library, This, United States National Library
related to Function · 3
PHF8 → EMT, SNAI1, ZEB1
Band · 2
PHF8 → Xp11.22, X|X F3
Chr. · 2
PHF8 → X chromosome (human), X chromosome (mouse)
End · 2
PHF8 → 150,416,855 bp, 54,048,958 bp
1.14.11.65 · 1
PHF8 → ↗

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

human bp gene chr band protein chromosome cleft lip activity location palate mouse phd finger function regulation external omim found

PHF8 relationships Subject–Predicate–Object triples

TTTA extracted 121 structured relationships around PHF8. Examples in this analysis include PHF8 → 1.14.11.65 → ↗ and PHF8 → Aliases → PHF8, JHDM1F, MRXSSD, ZNF422, PHD finger protein 8, KDM7B. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
PHF81.14.11.651.00infobox
PHF8AliasesPHF8, JHDM1F, MRXSSD, ZNF422, PHD finger protein 8, KDM7B1.00infobox
PHF8Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes4DO0, 3K3O, 2WWU, 3K3N, 3KV4,%%s2WWU, 3K3N, 3K3O, 3KV4, 4DO01.00infobox
PHF8BandXp11.221.00infobox
PHF8BandX|X F31.00infobox
PHF8Bgeeright testis1.00infobox
PHF8Bgeesural nerve1.00infobox
PHF8Bgeeleft testis1.00infobox
PHF8Bgeetesticle1.00infobox
PHF8Bgeetendon of biceps brachii1.00infobox
PHF8BgeeAchilles tendon1.00infobox
PHF8Bgeeepithelium of colon1.00infobox
PHF8Bgeeright lobe of liver1.00infobox
PHF8Bgeegonad1.00infobox
PHF8Bgeeright uterine tube1.00infobox
PHF8Bgeezygote1.00infobox
PHF8Bgeeprimary oocyte1.00infobox
PHF8Bgeeotic vesicle1.00infobox
PHF8Bgeesaccule1.00infobox
PHF8Bgeeblood1.00infobox
PHF8Bgeesecondary oocyte1.00infobox
PHF8Bgeeotic placode1.00infobox
PHF8BgeeGonadal ridge1.00infobox
PHF8Bgeegranulocyte1.00infobox
PHF8Bgeemedial ganglionic eminence1.00infobox
PHF8BioGPSn/a1.00infobox
PHF8Chr.X chromosome (human)1.00infobox
PHF8Chr.X chromosome (mouse)1.00infobox
PHF8DatabasesNCBI: entry; OMA: entry1.00infobox
PHF8End54,048,958 bp1.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around PHF8 bring nearby vocabulary together. In this analysis, examples include Activity, Protein and Human. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • PHF8
    • Activity
    • Protein
    • Human
    • Found
    • Palate
    • Cleft
    • Lip
    • Differentiation
    • Function
    • Nuclear
    • Omim
    • Regulation
  • phf8
    • Activity
    • Protein
    • Human
    • Found
    • Palate
    • Cleft
    • Lip
    • Differentiation
    • Function
    • Nuclear
    • Omim
    • Regulation
  • gene
    • Location
    • Chromosome
    • Protein
    • Bp
    • Chr
    • End
    • Function
    • Mouse
    • Phd
    • Regulation
    • Search
    • Xp11
  • function
    • Regulation
    • Search
    • Location
    • Activity
    • Chromosome
    • Demethylase
    • External
    • Histone
    • Iron
    • Protein
    • Bp
    • Chr
  • histone lysine demethylase
    • Demethylase
    • Histone
    • Iron
    • End
    • Function
    • Mouse
    • Nuclear
    • Regulation
    • Search
    • Location
    • Protein
    • Gene
  • cleft lip
    • Lip
    • Palate
    • Dysmorphism
    • Hypoxia
    • Disability
    • Intellectual
    • Phf8
    • Humans
    • Nuclear
    • Xp11
    • Found
    • Gene
  • cleft lip and palate
    • Lip
    • Palate
    • Dysmorphism
    • Hypoxia
    • Disability
    • Intellectual
    • Phf8
    • Xp11
    • Humans
    • Nuclear
    • Found
    • Gene
  • cleft lip/palate
    • Lip
    • Palate
    • Dysmorphism
    • Hypoxia
    • Disability
    • Intellectual
    • Phf8
    • Xp11
    • Humans
    • Nuclear
    • Found
    • Gene

Connections between topic areas Semantic bridges

For PHF8, one of the stronger structural bridges in this analysis connects PHF8 with Clinical significance. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
PHF8Clinical significance · splits 7 ⟂ 20
PHF8Overview · splits 24 ⟂ 3
PHF8Function · splits 24 ⟂ 3

Map overview Semantic statistics

PHF8

Nodes27
Edges26
Triples121
Avg. degree1.93
Density0.074074
Components1

Source & methodology

TTTA analyzes the structure around PHF8 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Clinical significance, Function & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — PHF8 · EN edition · Analysis: TopicsToTalkAbout

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