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PhagesDB: Art, Design and features & Access and rights to data

The Actinobacteriophage database, more commonly known as PhagesDB, is a bioinformatics website that collects and shares information related to the discovery, characterization, and genomics of viruses that typically infect Actinobacteria. At the start of 2026, the database contained information on more than 30,000 bacteriophages (phages), as well as over…

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PhagesDB topic overview

The analysis highlights Art, Design and features and Access and rights to data as prominent areas in the source structure around PhagesDB.

Related topics
8
Source areas
3
Connected nodes
11
Extracted relationships
10
Related term clusters
9
Bridge connections
11

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Overview · 5 topics
Design and features · 2 topics
Access and rights to data · 1 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Founded
April 2010
Location
Pittsburgh Bacteriophage Institute at the University of Pittsburgh
Affiliations
SEA-PHAGES (Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science)
Key people
Dr. Graham Hatfull (HHMI Professor), Dan Russell (Webmaster), Debbie Jacobs-Sera (Phagehunting Program Coordinator), Dr. Welkin H. Pope (Research Assistant Professor), and Dr. V…
Members
20,366 (as of 3/15/2022)

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PhagesDB
5Bioinformatics · Genomics · Virus
3Amino acid · Genome · Application programming interface

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Design and features

Access and rights to data

For the semantics nerds

You can skip this section if you’re here for content ideas and keyword inspiration.

Advanced semantic analysis

How PhagesDB connects Entity context

The extracted context around PhagesDB shows recurring relationship patterns in the source. For example, PhagesDB → API, Application Programming Interface, Information Another extracted example is PhagesDB → SEA-PHAGES (Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science). Use these groups to spot repeated connection types before inspecting the individual relationships.

PhagesDB

Top relations

related to Access and rights to data · 3
PhagesDB → API, Application Programming Interface, Information
Affiliations · 1
PhagesDB → SEA-PHAGES (Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science)
Founded · 1
PhagesDB → April 2010
Key people · 1
PhagesDB → Dr. Graham Hatfull (HHMI Professor), Dan Russell (Webmaster), Debbie Jacobs-Sera (Phagehunting Program Coordinator), Dr. Welkin H. Pope (Research Assistant Professor), and Dr. V…
Location · 1
PhagesDB → Pittsburgh Bacteriophage Institute at the University of Pittsburgh
Members · 1
PhagesDB → 20,366 (as of 3/15/2022)
Website · 1
PhagesDB → phagesdb.org
related to Design and features · 1
PhagesDB → GeneMark

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

database information genomics dr bioinformatics actinobacteriophage website phages well sequenced hhmi professor program bacteriophage data viruses actinobacteria bacteriophages different commonly

PhagesDB relationships Subject–Predicate–Object triples

TTTA extracted 10 structured relationships around PhagesDB. Examples in this analysis include PhagesDB → Affiliations → SEA-PHAGES (Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science) and PhagesDB → Founded → April 2010. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
PhagesDBAffiliationsSEA-PHAGES (Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science)1.00infobox
PhagesDBFoundedApril 20101.00infobox
PhagesDBKey peopleDr. Graham Hatfull (HHMI Professor), Dan Russell (Webmaster), Debbie Jacobs-Sera (Phagehunting Program Coordinator), Dr. Welkin H. Pope (Research Assistant Professor), and Dr. V…1.00infobox
PhagesDBLocationPittsburgh Bacteriophage Institute at the University of Pittsburgh1.00infobox
PhagesDBMembers20,366 (as of 3/15/2022)1.00infobox
PhagesDBWebsitephagesdb.org1.00infobox
PhagesDBrelated to Access and rights to dataInformation0.60section
PhagesDBrelated to Access and rights to dataApplication Programming Interface0.60section
PhagesDBrelated to Access and rights to dataAPI0.60section
PhagesDBrelated to Design and featuresGeneMark0.60section

Related concept clusters Related term clusters

The concept neighborhoods around PhagesDB bring nearby vocabulary together. In this analysis, examples include Website, Related and Shares. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • actinobacteria
    • Characterization
    • Collects
    • Commonly
    • Discovery
    • Infect
    • Known
    • Related
    • Shares
    • Typically
    • Viruses
    • Actinobacteriophage
    • Bioinformatics
  • bioinformatics
    • Genomics
    • Characterization
    • Collects
    • Commonly
    • Discovery
    • Infect
    • Known
    • Related
    • Shares
    • Typically
    • Viruses
    • Bacteriophage
  • genomics
    • Website
    • Phagesdb
    • Information
    • Infect
    • Known
    • Related
    • Shares
    • Typically
    • Viruses
    • Bacteriophage
    • Different
    • Hhmi
  • PhagesDB
    • Website
    • Related
    • Shares
    • Typically
    • Viruses
    • Data
    • Different
    • Hhmi
    • Program
    • Well
  • phagesdb
    • Website
    • Related
    • Shares
    • Typically
    • Viruses
    • Data
    • Different
    • Hhmi
    • Program
    • Well
  • access and rights to data
    • Design
    • Features
    • Rights
    • See
    • Actinobacteriophage
    • Bacteriophage
    • Data
    • Dr
    • Phagesdb
    • Database
  • bacteriophages
    • Contained
    • Fully
    • Start
    • Phages
    • Sequenced
    • Well
    • Information
    • Database
  • design and features
    • Access
    • Features
    • Rights
    • See
    • Bacteriophage
    • Data
    • Dr

Connections between topic areas Semantic bridges

For PhagesDB, one of the stronger structural bridges in this analysis connects PhagesDB with Overview. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.

Min side: 3
PhagesDB — Overview · splits 6 ⟂ 6
PhagesDB — Design and features · splits 9 ⟂ 3

Map overview Semantic statistics

PhagesDB

Nodes12
Edges11
Triples10
Avg. degree1.83
Density0.166667
Components1

Source & methodology

TTTA analyzes the structure around PhagesDB to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Art, Design and features & Access and rights to data, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — PhagesDB · EN edition · Analysis: TopicsToTalkAbout

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