JARID2

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Overview

Protein Gene Alpha-ketoglutarate-dependent hydroxylase Transcription factor Nuclear protein

14 related topics

Key facts & relationships

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Aliases: JARID2, JMJ, jumonji and AT-rich interaction domain containing 2
Available structures: Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes5HYN
Band: 6p22.3 · 13 A5|13 21.66 cM
Bgee: secondary oocyte · buccal mucosa cell · sperm · gingival epithelium · trabecular bone
BioGPS: More reference expression data
Chr.: Chromosome 6 (human) · Chromosome 13 (mouse)

Topics to explore

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Overview

Protein
Gene
Alpha-ketoglutarate-dependent hydroxylase
Transcription factor
Nuclear protein
Embryogenesis
AT-rich interaction domain ARID domain
Transcriptional Gene transcription
Gene trap
Organ development Organogenesis
Neural tube
Noncompaction of the ventricular wall Noncompaction cardiomyopathy
Atrial enlargement
Cardiomyocyte proliferation

Advanced semantic analysis

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Map overview Semantic statistics

Nodes16

Edges15

Triples107

Avg. degree1.88

Density0.125

Components1

How this topic connects Entity context

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JARID2

Top relations

Gene ontology · 38

JARID2 → cell differentiation, cellular response to leukemia inhibitory factor, central nervous system development, chromatin binding, chromatin organization, chromatin remodeling, DNA binding, DNA-binding transcription factor activity, RNA polymerase II-specific, DNA-binding transcription repressor activity, RNA polymerase II-specific, ESC/E(Z) complex, histone demethylase activity, histone demethylation, histone H3-K4 demethylation, trimethyl-H3-K4-specific, histone H3-tri/di/monomethyl-lysine-4 demethylase activity, histone methyltransferase complex, liver development, methylated histone binding, mitochondrion, multicellular organism development, negative regulation of cardiac muscle cell proliferation

Bgee · 19

JARID2 → amniotic fluid, Brodmann area 23, buccal mucosa cell, dorsal motor nucleus of vagus nerve, external carotid artery, gastrula, gingival epithelium, hair follicle, internal carotid artery, medullary collecting duct, nipple, renal corpuscle, Rostral migratory stream, secondary oocyte, sperm, tail of embryo, tendon of biceps brachii, trabecular bone, zygote

RNA expression pattern · 19

related to External links · 6

JARID2 → Medicine, Medicine Medical Subject Headings, MeSH, National Library, This, United States National Library

Band · 2

JARID2 → 13 A5|13 21.66 cM, 6p22.3

Chr. · 2

JARID2 → Chromosome 13 (mouse), Chromosome 6 (human)

End · 2

JARID2 → 15,522,042 bp, 45,075,119 bp

is a · 2

JARID2 → member of the alpha-ketoglutarate-dependent hydroxylase superfamily, member of the jumonji family that contains a DNA binding domain known as the AT-rich interaction domain

Aliases · 1

JARID2 → JARID2, JMJ, jumonji and AT-rich interaction domain containing 2

Available structures · 1

JARID2 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes5HYN

Important terminology Word statistics

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Important terminology

protein gene mouse human jumonji bp chr development band domain chromosome factor dna binding interaction search external location humans member

Entity relationships Subject–Predicate–Object triples

Subject	Predicate	Object	Confidence	Src
JARID2	Aliases	JARID2, JMJ, jumonji and AT-rich interaction domain containing 2	1.00	infobox
JARID2	Available structures	Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes5HYN	1.00	infobox
JARID2	Band	6p22.3	1.00	infobox
JARID2	Band	13 A5\|13 21.66 cM	1.00	infobox
JARID2	Bgee	secondary oocyte	1.00	infobox
JARID2	Bgee	buccal mucosa cell	1.00	infobox
JARID2	Bgee	sperm	1.00	infobox
JARID2	Bgee	gingival epithelium	1.00	infobox
JARID2	Bgee	trabecular bone	1.00	infobox
JARID2	Bgee	nipple	1.00	infobox
JARID2	Bgee	amniotic fluid	1.00	infobox
JARID2	Bgee	dorsal motor nucleus of vagus nerve	1.00	infobox
JARID2	Bgee	tendon of biceps brachii	1.00	infobox
JARID2	Bgee	Brodmann area 23	1.00	infobox
JARID2	Bgee	Rostral migratory stream	1.00	infobox
JARID2	Bgee	internal carotid artery	1.00	infobox
JARID2	Bgee	external carotid artery	1.00	infobox
JARID2	Bgee	tail of embryo	1.00	infobox
JARID2	Bgee	renal corpuscle	1.00	infobox
JARID2	Bgee	zygote	1.00	infobox
JARID2	Bgee	medullary collecting duct	1.00	infobox
JARID2	Bgee	gastrula	1.00	infobox
JARID2	Bgee	hair follicle	1.00	infobox
JARID2	BioGPS	More reference expression data	1.00	infobox
JARID2	Chr.	Chromosome 6 (human)	1.00	infobox
JARID2	Chr.	Chromosome 13 (mouse)	1.00	infobox
JARID2	Databases	NCBI: entry; OMA: entry	1.00	infobox
JARID2	End	15,522,042 bp	1.00	infobox
JARID2	End	45,075,119 bp	1.00	infobox
JARID2	Ensembl	ENSG00000008083	1.00	infobox

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