HMGB4

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Overview

Transcription factor Gene

2 related topics

Key facts & relationships

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Aliases: HMGB4, dJ1007G16.5, high mobility group box 4
Band: 1p35.1 · 4|4 D2.2
Bgee: right testis · left testis · sperm · testicle · tail of epididymis
BioGPS: n/a
Chr.: Chromosome 1 (human) · Chromosome 4 (mouse)
Databases: NCBI: entry; OMA: entry

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Overview

Advanced semantic analysis

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Map overview Semantic statistics

Nodes4

Edges3

Triples81

Avg. degree1.5

Density0.5

Components1

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HMGB4

Top relations

Gene ontology · 21

HMGB4 → activation of innate immune response, cell chemotaxis, chromatin remodeling, chromosome, cytoplasm, developmental process, DNA binding, DNA binding, bending, DNA recombination, nucleus, positive regulation of autophagy, positive regulation of ERK1 and ERK2 cascade, positive regulation of innate immune response, positive regulation of interleukin-6 production, positive regulation of NIK/NF-kappaB signaling, positive regulation of transcription by RNA polymerase II, positive regulation of tumor necrosis factor production, protein binding, regulation of signaling receptor activity, regulation of transcription by RNA polymerase II

Bgee · 20

HMGB4 → canal of the cervix, caput epididymis, central gray substance of midbrain, ectocervix, hypothalamus, islet of Langerhans, left testis, muscle tissue, pancreas, right coronary artery, right testis, right uterine tube, seminiferous tubule, skeletal muscle tissue, sperm, spermatid, spermatocyte, striated muscle tissue, tail of epididymis, testicle

RNA expression pattern · 20

Band · 2

HMGB4 → 1p35.1, 4|4 D2.2

Chr. · 2

HMGB4 → Chromosome 1 (human), Chromosome 4 (mouse)

End · 2

HMGB4 → 128,154,750 bp, 33,864,791 bp

Aliases · 1

HMGB4 → HMGB4, dJ1007G16.5, high mobility group box 4

BioGPS · 1

HMGB4 → n/a

Databases · 1

HMGB4 → NCBI: entry; OMA: entry

Ensembl · 1

HMGB4 → ENSG00000176256

Important terminology Word statistics

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Important terminology

bp chr human chromosome band gene group location mouse high mobility protein transcription factor 864 791 end 33 d2 154

Entity relationships Subject–Predicate–Object triples

Subject	Predicate	Object	Confidence	Src
HMGB4	Aliases	HMGB4, dJ1007G16.5, high mobility group box 4	1.00	infobox
HMGB4	Band	1p35.1	1.00	infobox
HMGB4	Band	4\|4 D2.2	1.00	infobox
HMGB4	Bgee	right testis	1.00	infobox
HMGB4	Bgee	left testis	1.00	infobox
HMGB4	Bgee	sperm	1.00	infobox
HMGB4	Bgee	testicle	1.00	infobox
HMGB4	Bgee	tail of epididymis	1.00	infobox
HMGB4	Bgee	right coronary artery	1.00	infobox
HMGB4	Bgee	caput epididymis	1.00	infobox
HMGB4	Bgee	ectocervix	1.00	infobox
HMGB4	Bgee	right uterine tube	1.00	infobox
HMGB4	Bgee	canal of the cervix	1.00	infobox
HMGB4	Bgee	seminiferous tubule	1.00	infobox
HMGB4	Bgee	spermatid	1.00	infobox
HMGB4	Bgee	spermatocyte	1.00	infobox
HMGB4	Bgee	muscle tissue	1.00	infobox
HMGB4	Bgee	central gray substance of midbrain	1.00	infobox
HMGB4	Bgee	striated muscle tissue	1.00	infobox
HMGB4	Bgee	pancreas	1.00	infobox
HMGB4	Bgee	skeletal muscle tissue	1.00	infobox
HMGB4	Bgee	islet of Langerhans	1.00	infobox
HMGB4	Bgee	hypothalamus	1.00	infobox
HMGB4	BioGPS	n/a	1.00	infobox
HMGB4	Chr.	Chromosome 1 (human)	1.00	infobox
HMGB4	Chr.	Chromosome 4 (mouse)	1.00	infobox
HMGB4	Databases	NCBI: entry; OMA: entry	1.00	infobox
HMGB4	End	33,864,791 bp	1.00	infobox
HMGB4	End	128,154,750 bp	1.00	infobox
HMGB4	Ensembl	ENSG00000176256	1.00	infobox

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