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GGPS1

Geranylgeranyl pyrophosphate synthase is an enzyme that in humans is encoded by the GGPS1 gene.

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4 related topics

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2 related topics

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2.5.1.1
2.5.1.10
2.5.1.29
Aliases
GGPS1, GGPPS, GGPPS1, geranylgeranyl diphosphate synthase 1, MDHLO, MUDHLOV
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2Q80
Band
1q42.3 · 13 A1|13 5.29 cM

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Map overview Semantic statistics

GGPS1

Nodes9
Edges8
Triples89
Avg. degree1.78
Density0.222222
Components1

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GGPS1

Top relations

Bgee · 20
GGPS1 → dentate gyrus of hippocampal formation granule cell, epithelium of colon, epithelium of lens, ganglionic eminence, genital tubercle, gingival epithelium, glutes, islet of Langerhans, lateral geniculate nucleus, left testis, medial ganglionic eminence, optic nerve, pineal gland, right testis, Rostral migratory stream, seminal vesicula, skin of thigh, sperm, tail of embryo, ventricular zone
RNA expression pattern · 20
GGPS1 → dentate gyrus of hippocampal formation granule cell, epithelium of colon, epithelium of lens, ganglionic eminence, genital tubercle, gingival epithelium, glutes, islet of Langerhans, lateral geniculate nucleus, left testis, medial ganglionic eminence, optic nerve, pineal gland, right testis, Rostral migratory stream, seminal vesicula, skin of thigh, sperm, tail of embryo, ventricular zone
Gene ontology · 16
GGPS1 → cholesterol biosynthetic process, cytoplasm, cytosol, dimethylallyltranstransferase activity, farnesyl diphosphate biosynthetic process, farnesyltranstransferase activity, geranyl diphosphate biosynthetic process, geranylgeranyl diphosphate biosynthetic process, geranyltranstransferase activity, identical protein binding, isoprenoid biosynthetic process, isoprenoid metabolic process, metal ion binding, protein binding, regulation of cholesterol biosynthetic process, transferase activity
related to Function · 6
GGPS1 → Alternate, C20-prenylation, GGPP, Much, The, This
Band · 2
GGPS1 → 13 A1|13 5.29 cM, 1q42.3
Chr. · 2
GGPS1 → Chromosome 1 (human), Chromosome 13 (mouse)
End · 2
GGPS1 → 14,238,073 bp, 235,344,532 bp
2.5.1.1 · 1
GGPS1 → ↗
2.5.1.10 · 1
GGPS1 → ↗
2.5.1.29 · 1
GGPS1 → ↗

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Important terminology

bp gene chr human band diphosphate geranylgeranyl chromosome synthase enzyme 29 location activity ggpp mouse farnesyl function search 344 532

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
GGPS12.5.1.11.00infobox
GGPS12.5.1.101.00infobox
GGPS12.5.1.291.00infobox
GGPS1AliasesGGPS1, GGPPS, GGPPS1, geranylgeranyl diphosphate synthase 1, MDHLO, MUDHLOV1.00infobox
GGPS1Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2Q801.00infobox
GGPS1Band1q42.31.00infobox
GGPS1Band13 A1|13 5.29 cM1.00infobox
GGPS1Bgeesperm1.00infobox
GGPS1Bgeeganglionic eminence1.00infobox
GGPS1Bgeeislet of Langerhans1.00infobox
GGPS1Bgeeskin of thigh1.00infobox
GGPS1Bgeeglutes1.00infobox
GGPS1Bgeeoptic nerve1.00infobox
GGPS1Bgeeepithelium of colon1.00infobox
GGPS1Bgeegingival epithelium1.00infobox
GGPS1Bgeeleft testis1.00infobox
GGPS1Bgeeright testis1.00infobox
GGPS1BgeeRostral migratory stream1.00infobox
GGPS1Bgeepineal gland1.00infobox
GGPS1Bgeegenital tubercle1.00infobox
GGPS1Bgeetail of embryo1.00infobox
GGPS1Bgeemedial ganglionic eminence1.00infobox
GGPS1Bgeeventricular zone1.00infobox
GGPS1Bgeelateral geniculate nucleus1.00infobox
GGPS1Bgeedentate gyrus of hippocampal formation granule cell1.00infobox
GGPS1Bgeeepithelium of lens1.00infobox
GGPS1Bgeeseminal vesicula1.00infobox
GGPS1BioGPSMore reference expression data1.00infobox
GGPS1Chr.Chromosome 1 (human)1.00infobox
GGPS1Chr.Chromosome 13 (mouse)1.00infobox

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