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Geranylgeranyl pyrophosphate synthase is an enzyme that in humans is encoded by the GGPS1 gene.
The analysis highlights Function and Overview as prominent areas in the source structure around GGPS1.
Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.
Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.
High-confidence facts extracted from structured source data. Use them as anchors for further research.
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The extracted context around GGPS1 shows recurring relationship patterns in the source. For example, GGPS1 → dentate gyrus of hippocampal formation granule cell, epithelium of colon, epithelium of lens, ganglionic eminence, genital tubercle, gingival epithelium, glutes, islet of Langerhans, lateral geniculate nucleus, left testis, medial ganglionic eminence, optic nerve, pineal gland, right testis, Rostral migratory stream, seminal vesicula, skin of thigh, sperm, tail of embryo, ventricular zone Another extracted example is GGPS1 → cholesterol biosynthetic process, cytoplasm, cytosol, dimethylallyltranstransferase activity, farnesyl diphosphate biosynthetic process, farnesyltranstransferase activity, geranyl diphosphate biosynthetic process, geranylgeranyl diphosphate biosynthetic process, geranyltranstransferase activity, identical protein binding, isoprenoid biosynthetic process, isoprenoid metabolic process, metal ion binding, protein binding, regulation of cholesterol biosynthetic process, transferase activity. Use these groups to spot repeated connection types before inspecting the individual relationships.
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bp gene chr human band diphosphate geranylgeranyl chromosome synthase enzyme 29 location activity ggpp mouse farnesyl function search 344 532
TTTA extracted 87 structured relationships around GGPS1. Examples in this analysis include GGPS1 → 2.5.1.1 → ↗ and GGPS1 → Aliases → GGPS1, GGPPS, GGPPS1, geranylgeranyl diphosphate synthase 1, MDHLO, MUDHLOV. The table shows each extracted connection, where it came from and its confidence.
| Subject | Predicate | Object | Confidence | Src |
|---|---|---|---|---|
| GGPS1 | 2.5.1.1 | ↗ | 1.00 | infobox |
| GGPS1 | 2.5.1.10 | ↗ | 1.00 | infobox |
| GGPS1 | 2.5.1.29 | ↗ | 1.00 | infobox |
| GGPS1 | Aliases | GGPS1, GGPPS, GGPPS1, geranylgeranyl diphosphate synthase 1, MDHLO, MUDHLOV | 1.00 | infobox |
| GGPS1 | Available structures | Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2Q80 | 1.00 | infobox |
| GGPS1 | Band | 1q42.3 | 1.00 | infobox |
| GGPS1 | Band | 13 A1|13 5.29 cM | 1.00 | infobox |
| GGPS1 | Bgee | sperm | 1.00 | infobox |
| GGPS1 | Bgee | ganglionic eminence | 1.00 | infobox |
| GGPS1 | Bgee | islet of Langerhans | 1.00 | infobox |
| GGPS1 | Bgee | skin of thigh | 1.00 | infobox |
| GGPS1 | Bgee | glutes | 1.00 | infobox |
| GGPS1 | Bgee | optic nerve | 1.00 | infobox |
| GGPS1 | Bgee | epithelium of colon | 1.00 | infobox |
| GGPS1 | Bgee | gingival epithelium | 1.00 | infobox |
| GGPS1 | Bgee | left testis | 1.00 | infobox |
| GGPS1 | Bgee | right testis | 1.00 | infobox |
| GGPS1 | Bgee | Rostral migratory stream | 1.00 | infobox |
| GGPS1 | Bgee | pineal gland | 1.00 | infobox |
| GGPS1 | Bgee | genital tubercle | 1.00 | infobox |
| GGPS1 | Bgee | tail of embryo | 1.00 | infobox |
| GGPS1 | Bgee | medial ganglionic eminence | 1.00 | infobox |
| GGPS1 | Bgee | ventricular zone | 1.00 | infobox |
| GGPS1 | Bgee | lateral geniculate nucleus | 1.00 | infobox |
| GGPS1 | Bgee | dentate gyrus of hippocampal formation granule cell | 1.00 | infobox |
| GGPS1 | Bgee | epithelium of lens | 1.00 | infobox |
| GGPS1 | Bgee | seminal vesicula | 1.00 | infobox |
| GGPS1 | BioGPS | More reference expression data | 1.00 | infobox |
| GGPS1 | Chr. | Chromosome 1 (human) | 1.00 | infobox |
| GGPS1 | Chr. | Chromosome 13 (mouse) | 1.00 | infobox |
The concept neighborhoods around GGPS1 bring nearby vocabulary together. In this analysis, examples include Synthase, Diphosphate and Activity. Use the clusters to find adjacent concepts and terminology that may deserve separate research.
For GGPS1, one of the stronger structural bridges in this analysis connects GGPS1 with Function. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.
TTTA analyzes the structure around GGPS1 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Function & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.
Source: Wikipedia — GGPS1 · EN edition · Analysis: TopicsToTalkAbout
