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GDF5: Overview, Related Topics & Entities

Growth/differentiation factor 5 is a protein that in humans is encoded by the GDF5 gene.

Language: English [EN]
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GDF5 topic overview

The analysis highlights Overview, Related Topics and Entities as prominent areas in the source structure around GDF5.

Related topics
9
Source areas
1
Connected nodes
10
Extracted relationships
99
Concept neighborhoods
4
Bridge connections
10

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Overview · 9 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

Aliases
GDF5, BDA1C, BMP-14, BMP14, CDMP1, LAP-4, LAP4, OS5, SYM1B, SYNS2, growth differentiation factor 5, DUPANS
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1WAQ, 2BHK, 3EVS, 3QB4
Band
20q11.22 · 2 H1|2 77.26 cM
Bgee
parotid gland · pericardium · cartilage tissue · synovial joint · synovial membrane
BioGPS
More reference expression data
Chr.
Chromosome 20 (human) · Chromosome 2 (mouse)

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How GDF5 connects Entity context

The extracted context around GDF5 shows recurring relationship patterns in the source. For example, GDF5 → BMP binding, BMP signaling pathway, cartilage development, cell development, cell-cell signaling, chondroblast differentiation, chondrocyte differentiation, cytokine activity, embryonic limb morphogenesis, extracellular region, extracellular space, forelimb morphogenesis, growth factor activity, hindlimb morphogenesis, identical protein binding, membrane, negative regulation of chondrocyte differentiation, negative regulation of epithelial cell proliferation, negative regulation of mesenchymal cell apoptotic process, negative regulation of neuron apoptotic process Another extracted example is GDF5 → annulus fibrosus disci intervertebralis, cartilage tissue, cuneiform bones, elbow, finger, hand joint, interphalangeal joint of hand, joints of the foot, lacrimal gland, minor salivary glands, molar, oral mucosa, parotid gland, pericardium, pharynx, sensory nervous system, synovial joint, synovial membrane, upper respiratory tract. Use these groups to spot repeated connection types before inspecting the individual relationships.

GDF5

Top relations

Gene ontology · 38
GDF5 → BMP binding, BMP signaling pathway, cartilage development, cell development, cell-cell signaling, chondroblast differentiation, chondrocyte differentiation, cytokine activity, embryonic limb morphogenesis, extracellular region, extracellular space, forelimb morphogenesis, growth factor activity, hindlimb morphogenesis, identical protein binding, membrane, negative regulation of chondrocyte differentiation, negative regulation of epithelial cell proliferation, negative regulation of mesenchymal cell apoptotic process, negative regulation of neuron apoptotic process
Bgee · 19
GDF5 → annulus fibrosus disci intervertebralis, cartilage tissue, cuneiform bones, elbow, finger, hand joint, interphalangeal joint of hand, joints of the foot, lacrimal gland, minor salivary glands, molar, oral mucosa, parotid gland, pericardium, pharynx, sensory nervous system, synovial joint, synovial membrane, upper respiratory tract
RNA expression pattern · 19
GDF5 → annulus fibrosus disci intervertebralis, cartilage tissue, cuneiform bones, elbow, finger, hand joint, interphalangeal joint of hand, joints of the foot, lacrimal gland, minor salivary glands, molar, oral mucosa, parotid gland, pericardium, pharynx, sensory nervous system, synovial joint, synovial membrane, upper respiratory tract
Band · 2
GDF5 → 2 H1|2 77.26 cM, 20q11.22
Chr. · 2
GDF5 → Chromosome 2 (mouse), Chromosome 20 (human)
End · 2
GDF5 → 155,787,287 bp, 35,454,746 bp
Aliases · 1
GDF5 → GDF5, BDA1C, BMP-14, BMP14, CDMP1, LAP-4, LAP4, OS5, SYM1B, SYNS2, growth differentiation factor 5, DUPANS
Available structures · 1
GDF5 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1WAQ, 2BHK, 3EVS, 3QB4
BioGPS · 1
GDF5 → More reference expression data
Databases · 1
GDF5 → NCBI: entry; OMA: entry

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

gene bp protein chr human band growth differentiation chromosome 20 development factor location encoded family associated role skeletal also mouse

GDF5 relationships Subject–Predicate–Object triples

TTTA extracted 99 structured relationships around GDF5. Examples in this analysis include GDF5 → Aliases → GDF5, BDA1C, BMP-14, BMP14, CDMP1, LAP-4, LAP4, OS5, SYM1B, SYNS2, growth differentiation factor 5, DUPANS and GDF5 → Available structures → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1WAQ, 2BHK, 3EVS, 3QB4. The table shows each extracted connection, where it came from and its confidence.

SubjectPredicateObjectConfidenceSrc
GDF5AliasesGDF5, BDA1C, BMP-14, BMP14, CDMP1, LAP-4, LAP4, OS5, SYM1B, SYNS2, growth differentiation factor 5, DUPANS1.00infobox
GDF5Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes1WAQ, 2BHK, 3EVS, 3QB41.00infobox
GDF5Band20q11.221.00infobox
GDF5Band2 H1|2 77.26 cM1.00infobox
GDF5Bgeeparotid gland1.00infobox
GDF5Bgeepericardium1.00infobox
GDF5Bgeecartilage tissue1.00infobox
GDF5Bgeesynovial joint1.00infobox
GDF5Bgeesynovial membrane1.00infobox
GDF5Bgeeoral mucosa1.00infobox
GDF5Bgeeminor salivary glands1.00infobox
GDF5Bgeesensory nervous system1.00infobox
GDF5Bgeepharynx1.00infobox
GDF5Bgeeupper respiratory tract1.00infobox
GDF5Bgeefinger1.00infobox
GDF5Bgeeelbow1.00infobox
GDF5Bgeehand joint1.00infobox
GDF5Bgeejoints of the foot1.00infobox
GDF5Bgeelacrimal gland1.00infobox
GDF5Bgeeinterphalangeal joint of hand1.00infobox
GDF5Bgeeannulus fibrosus disci intervertebralis1.00infobox
GDF5Bgeemolar1.00infobox
GDF5Bgeecuneiform bones1.00infobox
GDF5BioGPSMore reference expression data1.00infobox
GDF5Chr.Chromosome 20 (human)1.00infobox
GDF5Chr.Chromosome 2 (mouse)1.00infobox
GDF5DatabasesNCBI: entry; OMA: entry1.00infobox
GDF5End35,454,746 bp1.00infobox
GDF5End155,787,287 bp1.00infobox
GDF5EnsemblENSG000001259651.00infobox

Related concept clusters Concept neighborhoods

The concept neighborhoods around GDF5 bring nearby vocabulary together. In this analysis, examples include Growth, Expressed and Joint. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

  • GDF5
    • Growth
    • Expressed
    • Joint
    • Nervous
    • Search
    • System
    • Development
    • Location
    • Gene
    • Chromosome
    • Human
    • Protein
  • gdf5
    • Growth
    • Expressed
    • Joint
    • Nervous
    • Search
    • System
    • Development
    • Location
    • Gene
    • Chromosome
    • Human
    • Protein
  • gene
    • Location
    • Chromosome
    • Growth
    • Human
    • Protein
    • Bp
    • Chr
    • Bmp
    • Bone
    • End
    • Grebe
    • H1
  • protein
    • Search
    • System
    • Type

Connections between topic areas Semantic bridges

Bridges highlight paths between different parts of the GDF5 map and can reveal research angles that are easy to miss in a flat list.

Min side: 3

Map overview Semantic statistics

GDF5

Nodes11
Edges10
Triples99
Avg. degree1.82
Density0.181818
Components1

Source & methodology

TTTA analyzes the structure around GDF5 to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Overview, Related Topics & Entities, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — GDF5 · EN edition · Analysis: TopicsToTalkAbout

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