Dockerin

Use the mouse wheel or two fingers (on touchscreens) to zoom in and out of the map.

Map view:

Zoom: 100%

More settings

Connection length 100% Label size 100% Node size 100% Line width 100% Label width 100%

Export map as:

Dockerin topic overview

The analysis highlights Art and Overview as prominent areas in the source structure around Dockerin.

Related topics: 12
Source areas: 1
Connected nodes: 13
Extracted relationships: 27
Concept neighborhoods: 13
Bridge connections: 13

What this topic covers Research coverage

Source areas are shown by the number of related topics found in each part of the analysis. Use smaller areas too: they can reveal specialized angles and content gaps.

Overview · 12 topics

Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.

Key facts & relationships

High-confidence facts extracted from structured source data. Use them as anchors for further research.

AlphaFold: IPR018242 · PF00404
Available protein structures:: IPR018242 · PF00404
CDD: cd14253
InterPro: IPR018242
PDB: IPR018242 PF00404 (ECOD; PDBsum)
Pfam: PF00404

Explore all related topics Closing gaps

Browse the complete topic structure, not only the most central items. Less prominent entities and concepts can reveal missing angles, specialized context and useful research gaps. Each item opens a new analysis centered on that subject.

Overview

Protein domain
Cellulosome
Anaerobic bacteria
Endoglucanase
Cohesin Cohesin domain
Scaffoldin
Protein
Enzyme
EF hand
Loop-helix structure Loop-helix structure?action=edit&redlink=1
Residues Residue (chemistry)
Mutagenesis

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

How Dockerin connects Entity context

The extracted context around Dockerin shows recurring relationship patterns in the source. For example, Dockerin → Bayer EA, Cellulosomes-structure, Heckman MP, Lamed, Lytle BL, Mol Biol, PMID, Protein Structure, Shimon LJ, Shoham, Solution, Struct Biol, Volkman BF, Westler WM, Wu JH Another extracted example is Dockerin → IPR018242, PF00404. Use these groups to spot repeated connection types before inspecting the individual relationships.

Top relations

related to External links · 15

Dockerin → Bayer EA, Cellulosomes-structure, Heckman MP, Lamed, Lytle BL, Mol Biol, PMID, Protein Structure, Shimon LJ, Shoham, Solution, Struct Biol, Volkman BF, Westler WM, Wu JH

AlphaFold · 2

Dockerin → IPR018242, PF00404

Available protein structures: · 2

Dockerin → IPR018242, PF00404

CDD · 1

Dockerin → cd14253

InterPro · 1

Dockerin → IPR018242

PDB · 1

Dockerin → IPR018242 PF00404 (ECOD; PDBsum)

Pfam · 1

Dockerin → PF00404

PROSITE · 1

Dockerin → PDOC00416

SCOP2 · 1

Dockerin → 1daq / SCOPe / SUPFAM

Symbol · 1

Dockerin → Dockerin_1

Important terminology

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

type domain protein cohesin structure cellulosome binding doi pmid interaction well 10 domains ii scaffoldin specificity found complex motif characterized

Dockerin relationships Subject–Predicate–Object triples

TTTA extracted 27 structured relationships around Dockerin. Examples in this analysis include Dockerin → AlphaFold → IPR018242 and Dockerin → AlphaFold → PF00404. The table shows each extracted connection, where it came from and its confidence.

Subject	Predicate	Object	Confidence	Src
Dockerin	AlphaFold	IPR018242	1.00	infobox
Dockerin	AlphaFold	PF00404	1.00	infobox
Dockerin	Available protein structures:	IPR018242	1.00	infobox
Dockerin	Available protein structures:	PF00404	1.00	infobox
Dockerin	CDD	cd14253	1.00	infobox
Dockerin	InterPro	IPR018242	1.00	infobox
Dockerin	PDB	IPR018242 PF00404 (ECOD; PDBsum)	1.00	infobox
Dockerin	Pfam	PF00404	1.00	infobox
Dockerin	PROSITE	PDOC00416	1.00	infobox
Dockerin	SCOP2	1daq / SCOPe / SUPFAM	1.00	infobox
Dockerin	Symbol	Dockerin_1	1.00	infobox
Dockerin	is a	protein domain found in the cellulosome cellular structure of anaerobic bacteria	0.90	text

Related concept clusters Concept neighborhoods

The concept neighborhoods around Dockerin bring nearby vocabulary together. In this analysis, examples include Cellulosome, Domain and Type. Use the clusters to find adjacent concepts and terminology that may deserve separate research.

Dockerin
- Cellulosome
- Domain
- Type
- Cohesin
- Structure
- Domains
- Thermocellum
- Protein
- Complex
- Hand
- Jh
- Solution
dockerin
- Cellulosome
- Domain
- Type
- Cohesin
- Structure
- Domains
- Thermocellum
- Protein
- Complex
- Hand
- Jh
- Solution
protein domain
- Scaffoldin
- Protein
- Structure
- Hand
- Type
- Binding
- Cohesin
- Enzyme
- Bayer
- Complex
- Ea
- Jh
cellulosome
- Dockerin
- Protein
- Structure
- Domain
- Thermocellum
- Type
- Enzyme
- Complex
- Found
- Hand
- Jh
- Scaffoldin
protein
- Scaffoldin
- Cohesin
- Structure
- Enzyme
- Bayer
- Complex
- Ea
- Hand
- Jh
- Lamed
- Shoham
- Solution
cohesin
- Domains
- Complex
- Scaffoldin
- Dockerin
- Protein
- Enzyme
- Jh
- Solution
- Wu
- Ii
- Interaction
- Specificity
scaffoldin
- Enzyme
- Cohesin
- Protein
- Complex
- Domains
- Interaction
- Binding
- Cellulosome
- Domain
- Dockerin
ef hand
- Jh
- Motif
- Solution
- Two
- Wu
- Protein
- Structure
- Type

Connections between topic areas Semantic bridges

Bridges highlight paths between different parts of the Dockerin map and can reveal research angles that are easy to miss in a flat list.

Min side: 3

Map overview Semantic statistics

Dockerin

Nodes14

Edges13

Triples27

Avg. degree1.86

Density0.142857

Components1

Source & methodology

TTTA analyzes the structure around Dockerin to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Art & Overview, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.

Source: Wikipedia — Dockerin · EN edition · Analysis: TopicsToTalkAbout