DbSNP

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Retrieval

Introns Exons Nucleotide Protein Gene

10 related topics

Problems With Data Quality

False positive Genotyping Bioinformatic PCRs Primers

7 related topics

Submission

Organism HapMap DNA CDNA Mitochondrial

6 related topics

Purpose

Biology Database Population genetics Pharmacogenomics

4 related topics

Key facts & relationships

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Data format: ASN.1, FASTA, XML
Description: Single Nucleotide Polymorphism Database
Download URL: ftp://ftp.ncbi.nih.gov/snp/
Organisms: Homo sapiens
Release date: 1998
Research center: National Center for Biotechnology Information

Topics to explore

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Overview

Purpose

Submission

Retrieval

Problems With Data Quality

False positive
Genotyping
Bioinformatic
PCRs Polymerase chain reaction
Primers Primer (molecular biology)
Allele
Haplotype

Advanced semantic analysis

Deeper signals for content research, entity SEO and topical coverage. The plain-language headings explain what each technical view is useful for.

Map overview Semantic statistics

Nodes43

Edges42

Triples98

Avg. degree1.95

Density0.046512

Components1

How this topic connects Entity context

See the strongest relationship patterns around the current topic before diving into the raw triples.

DbSNP

Top relations

related to Release · 17

DbSNP → DIP, First, Genome, However, ID, IDs, In, Multiple, New, Secondly, SNP, SNP ID, SNPs, There, These, This, When

related to Problems With Data Quality · 13

DbSNP → DNA, Errors, HapMap, However, Lee, Mitchell, Musemeci, PCRs, Similarly, SNDs, SNPs, The, These

related to 2. Tools/Data · 12

DbSNP → Another, Many, Map, NCBI, OMIM, PMC, PubMed, Sequence, Submission, The, UniGene, UniSTS

related to How to cite data from dbSNP · 11

DbSNP → Baker, ID, Individual, Kholodov, NCBI, Nucleic Acids Research, Phan, Sherry, Sirotkin, Smigielski, Ward

related to 2. Types of records · 7

DbSNP → Every, However, SNP, SNP ID, This, To, Unique

related to 1. How to · 6

DbSNP → Entrez SNP, ID, IDs, In, Searches, The

related to 1. Source · 6

DbSNP → HapMap, NCBI, Now, On September, Originally, SNP

related to Purpose · 6

DbSNP → According, In, Its, NCBI, Specifically, The

related to 3. How to submit · 5

DbSNP → DNA, Next, Other, Submitted, To

Data format · 1

DbSNP → ASN.1, FASTA, XML

Important terminology Word statistics

Use these terms to understand the vocabulary surrounding the topic, not as a checklist for keyword stuffing.

Important terminology

refsnp variation ncbi number snps data records submissions also snp information available database nucleotide research single sequences submitted cluster id

Entity relationships Subject–Predicate–Object triples

Subject	Predicate	Object	Confidence	Src
DbSNP	Data format	ASN.1, FASTA, XML	1.00	infobox
DbSNP	Description	Single Nucleotide Polymorphism Database	1.00	infobox
DbSNP	Download URL	ftp://ftp.ncbi.nih.gov/snp/	1.00	infobox
DbSNP	Organisms	Homo sapiens	1.00	infobox
DbSNP	Primary citation	.mw-parser-output cite.citation{font-style:inherit;word-wrap:break-word}.mw-parser-output .citation q{quotes:"\"""\"""'""'"}.mw-parser-output .citation:target{background-color:r…	1.00	infobox
DbSNP	Release date	1998	1.00	infobox
DbSNP	Research center	National Center for Biotechnology Information	1.00	infobox
DbSNP	Web service URL	EUtils SOAP	1.00	infobox
DbSNP	Website	ncbi.nlm.nih.gov/snp/	1.00	infobox
physical mapping	instance of	access to the molecular variation cataloged within dbSNP aids basic research	0.80	text
population genetics	instance of	access to the molecular variation cataloged within dbSNP aids basic research	0.80	text
investigations into evolutionary relationships	instance of	access to the molecular variation cataloged within dbSNP aids basic research	0.80	text

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Connections between topic areas Semantic bridges

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