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CPSF3

Cleavage and polyadenylation specificity factor subunit 3 is a protein that in humans is encoded by the CPSF3 gene.

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Aliases
CPSF3, CPSF-73, CPSF73, cleavage and polyadenylation specific factor 3
Available structures
Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2I7T, 2I7V
Band
2p25.1 · 12|12 A1.3
Bgee
ganglionic eminence · ventricular zone · left testis · right testis · endothelial cell
BioGPS
n/a
Chr.
Chromosome 2 (human) · Chromosome 12 (mouse)

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Map overview Semantic statistics

CPSF3

Nodes4
Edges3
Triples88
Avg. degree1.5
Density0.5
Components1

How this topic connects Entity context

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CPSF3

Top relations

Gene ontology · 23
CPSF3 → 5'-3' exonuclease activity, endonuclease activity, endoribonuclease activity, hydrolase activity, metal ion binding, mRNA 3'-end processing, mRNA 3'-end processing by stem-loop binding and cleavage, mRNA cleavage, mRNA cleavage and polyadenylation specificity factor complex, mRNA export from nucleus, mRNA polyadenylation, mRNA processing, mRNA splicing, via spliceosome, nuclease activity, nucleoplasm, nucleus, pre-mRNA cleavage required for polyadenylation, protein binding, RNA binding, RNA phosphodiester bond hydrolysis, endonucleolytic
Bgee · 20
CPSF3 → condyle, endothelial cell, endothelial cell of lymphatic vessel, Epithelium of choroid plexus, external carotid artery, fossa, ganglionic eminence, internal carotid artery, islet of Langerhans, left testis, medullary collecting duct, monocyte, primitive streak, right testis, sperm, stromal cell of endometrium, tendon of biceps brachii, ureter, vas deferens, ventricular zone
RNA expression pattern · 20
CPSF3 → condyle, endothelial cell, endothelial cell of lymphatic vessel, Epithelium of choroid plexus, external carotid artery, fossa, ganglionic eminence, internal carotid artery, islet of Langerhans, left testis, medullary collecting duct, monocyte, primitive streak, right testis, sperm, stromal cell of endometrium, tendon of biceps brachii, ureter, vas deferens, ventricular zone
Band · 2
CPSF3 → 12|12 A1.3, 2p25.1
Chr. · 2
CPSF3 → Chromosome 12 (mouse), Chromosome 2 (human)
End · 2
CPSF3 → 21,365,057 bp, 9,473,101 bp
related to External links · 2
CPSF3 → Human CPSF3, UCSC Genome Browser
Aliases · 1
CPSF3 → CPSF3, CPSF-73, CPSF73, cleavage and polyadenylation specific factor 3
Available structures · 1
CPSF3 → Available structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2I7T, 2I7V
BioGPS · 1
CPSF3 → n/a

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Important terminology

bp human gene chr band chromosome location cleavage polyadenylation factor external protein mouse specificity search 473 101 end 12 a1

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
CPSF3AliasesCPSF3, CPSF-73, CPSF73, cleavage and polyadenylation specific factor 31.00infobox
CPSF3Available structuresAvailable structuresPDBOrtholog search: PDBe RCSB List of PDB id codes2I7T, 2I7V1.00infobox
CPSF3Band2p25.11.00infobox
CPSF3Band12|12 A1.31.00infobox
CPSF3Bgeeganglionic eminence1.00infobox
CPSF3Bgeeventricular zone1.00infobox
CPSF3Bgeeleft testis1.00infobox
CPSF3Bgeeright testis1.00infobox
CPSF3Bgeeendothelial cell1.00infobox
CPSF3Bgeetendon of biceps brachii1.00infobox
CPSF3Bgeesperm1.00infobox
CPSF3Bgeemonocyte1.00infobox
CPSF3Bgeestromal cell of endometrium1.00infobox
CPSF3Bgeeislet of Langerhans1.00infobox
CPSF3Bgeeprimitive streak1.00infobox
CPSF3Bgeemedullary collecting duct1.00infobox
CPSF3Bgeeureter1.00infobox
CPSF3Bgeeinternal carotid artery1.00infobox
CPSF3Bgeecondyle1.00infobox
CPSF3Bgeefossa1.00infobox
CPSF3Bgeevas deferens1.00infobox
CPSF3BgeeEpithelium of choroid plexus1.00infobox
CPSF3Bgeeexternal carotid artery1.00infobox
CPSF3Bgeeendothelial cell of lymphatic vessel1.00infobox
CPSF3BioGPSn/a1.00infobox
CPSF3Chr.Chromosome 2 (human)1.00infobox
CPSF3Chr.Chromosome 12 (mouse)1.00infobox
CPSF3DatabasesNCBI: entry; OMA: entry1.00infobox
CPSF3End9,473,101 bp1.00infobox
CPSF3End21,365,057 bp1.00infobox

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