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Computational genomics

Computational genomics refers to the use of computational and statistical analysis to decipher biology from genome sequences and related data, including both DNA and RNA sequence as well as other "post-genomic" data (i.e., experimental data obtained with technologies that require the genome sequence, such as genomic DNA microarrays). These, in…

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History

Margaret DayhoffPhylogenetic treeAmino acidNeedleman-Wunsch algorithmDynamic programming
18 related topics

Contributions of computational genomics research to biology

Cellular signallingGenesComparative genomicsSpeciesConserved
6 related topics

Genome comparison

AlignmentAverage Nucleotide IdentityMinhashHash functionK-mers
6 related topics

Biosynthetic gene clusters

K-medoidsAffinity propagationSatria et. al, 2021
3 related topics

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Overview

History

Contributions of computational genomics research to biology

Genome comparison

Clusterization of genomic data

Biosynthetic gene clusters

Compression algorithms

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Computational genomics

Nodes51
Edges50
Triples26
Avg. degree1.96
Density0.039216
Components1

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Computational genomics

Top relations

related to history · 14
Computational genomics → Beginning, BLAST, Dayhoff, During, Google, Later, Margaret Dayhoff, National Biomedical Research Foundation, Needleman-Wunsch, The, Their, This, Unlike, Wikipedia
related to External links · 4
Computational genomics → Bristol, Computational Biology, Genomics, Harvard Extension School Biophysics
related to Contributions of computational genomics research to biology · 1
Computational genomics → Contributions

Important terminology Word statistics

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Important terminology

computational genomics data gene genome genomic sequences biology analysis research developed genes sequence using genomes one biosynthetic compression algorithms bgcs

Entity relationships Subject–Predicate–Object triples

SubjectPredicateObjectConfidenceSrc
Google or Wikipediainstance ofUnlike text-searching algorithms that are used on websites0.80text
searching for sections of genetic similarity requires one to find strings that are not simply identicalinstance ofUnlike text-searching algorithms that are used on websites0.80text
but similarinstance ofUnlike text-searching algorithms that are used on websites0.80text
Mathematica or Matlabinstance ofusing products0.80text
Average Nucleotide Identityinstance ofSome of them are alignment-based distances0.80text
k-medoidsinstance ofand clusterization algorithms0.80text
affinity propagationinstance ofand clusterization algorithms0.80text
Computational genomicsrelated to Contributions of computational genomics research to biologyContributions0.60section
Computational genomicsrelated to External linksHarvard Extension School Biophysics0.60section
Computational genomicsrelated to External linksGenomics0.60section
Computational genomicsrelated to External linksComputational Biology0.60section
Computational genomicsrelated to External linksBristol0.60section

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