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The 23S rRNA is a 2,904 nucleotide long (in E. coli) component of the large subunit (50S) of the bacterial/archean ribosome and makes up the peptidyl transferase center (PTC). The 23S rRNA is divided into six secondary structural domains titled I-VI, with the corresponding 5S rRNA being considered domain VII. The ribosomal peptidyl transferase activity…
The analysis highlights Regions and Measurement as prominent areas in the source structure around 23S ribosomal RNA.
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Smaller areas are not necessarily less important. They contain fewer connections in this analysis and can be useful for finding specialized angles or coverage gaps.
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The extracted context around 23S ribosomal RNA shows recurring relationship patterns in the source. For example, 23S ribosomal RNA → Comparison, Domain, Helices, Helix, RNA Another extracted example is 23S ribosomal RNA → Bacteria. Use these groups to spot repeated connection types before inspecting the individual relationships.
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rrna 23s ribosomal domains domain binding peptidyl transferase rna helix also site ribosome 26a large subunit lsu 50s peptidyl-trna modification
TTTA extracted 11 structured relationships around 23S ribosomal RNA. Examples in this analysis include 23S ribosomal RNA → Domain → Bacteria and 23S ribosomal RNA → PDB structures → PDBe. The table shows each extracted connection, where it came from and its confidence.
| Subject | Predicate | Object | Confidence | Src |
|---|---|---|---|---|
| 23S ribosomal RNA | Domain | Bacteria | 1.00 | infobox |
| 23S ribosomal RNA | PDB structures | PDBe | 1.00 | infobox |
| 23S ribosomal RNA | Rfam | RF02541 | 1.00 | infobox |
| 23S ribosomal RNA | RNA type | Gene; rRNA | 1.00 | infobox |
| 23S ribosomal RNA | SO | SO:0001000 | 1.00 | infobox |
| 23S ribosomal RNA | Symbol | LSU_rRNA_bacteria | 1.00 | infobox |
| 23S ribosomal RNA | related to 23S rRNA Helix 26a | RNA | 0.60 | section |
| 23S ribosomal RNA | related to 23S rRNA Helix 26a | Helix | 0.60 | section |
| 23S ribosomal RNA | related to 23S rRNA Helix 26a | Domain | 0.60 | section |
| 23S ribosomal RNA | related to 23S rRNA Helix 26a | Comparison | 0.60 | section |
| 23S ribosomal RNA | related to 23S rRNA Helix 26a | Helices | 0.60 | section |
The concept neighborhoods around 23S ribosomal RNA bring nearby vocabulary together. In this analysis, examples include Rrna, Ribosomal and Rna. Use the clusters to find adjacent concepts and terminology that may deserve separate research.
For 23S ribosomal RNA, one of the stronger structural bridges in this analysis connects 23S ribosomal RNA with Overview. Bridges highlight paths between different parts of the map and can reveal research angles that are easy to miss in a flat list.
TTTA analyzes the structure around 23S ribosomal RNA to surface related topics, entities, relationships, concept neighborhoods and bridge connections. Use the map to explore areas such as Regions & Measurement, including less central topics that may reveal useful research gaps. Automatically extracted connections are research leads rather than rewritten encyclopedia content.
Source: Wikipedia — 23S ribosomal RNA · EN edition · Analysis: TopicsToTalkAbout